Detail information of GWHGAAEX010795/evm.TU.scaffold_32.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743855986|ref|XP_010941713.1|1.21E-64PREDICTED: pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like [Elaeis guineensis]
trEMBLtr|A0A067LG57|A0A067LG57_JATCU1.00E-33Uncharacterized protein {ECO:0000313|EMBL:KDP43134.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003236893993690662-
Transcript Sequence

Network for GWHGAAEX010795

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01535.19PPR1491710.053
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.510
SRR2545915Juvenile tuber1.450
SRP108465SRR5643513five period of Gastrodia elata4.570
SRR5643514five period of Gastrodia elata5.130
SRR5643515five period of Gastrodia elata3.820
SRR5643524five period of Gastrodia elata5.900
SRR5643525five period of Gastrodia elata5.770
SRR5643528five period of Gastrodia elata3.190
SRR5643658five period of Gastrodia elata6.340
SRR5643659five period of Gastrodia elata4.280
SRR5643660five period of Gastrodia elata5.090
SRR5643661five period of Gastrodia elata6.520
SRR5643662five period of Gastrodia elata5.750
SRR5643663five period of Gastrodia elata3.390
SRR5643664five period of Gastrodia elata3.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.930
SRR6049655Rhizomagastrodiae_C368-T10_good_19.980
SRR6049656Rhizomagastrodiae_C368-T07_good_15.240
SRR6049657Rhizomagastrodiae_C368-T07_good_13.100
SRR6049658Rhizomagastrodiae_C368-T04_good_13.870
SRR6049659Rhizomagastrodiae_C368-T04_good_13.690
SRR6049660Rhizomagastrodiae_C368-T01_good_13.670
SRR6049661Rhizomagastrodiae_C368-T04_good_13.720
SRR6049662Rhizomagastrodiae_C368-T01_good_15.810
SRR6049663Rhizomagastrodiae_C368-T01_good_14.420
SRR6049664Rhizomagastrodiae_C368-T10_good_15.920
SRR6049665Rhizomagastrodiae_C368-T10_good_15.920
SRP279888GastroGastrodia elata tuber 3.34
JuvenJuvenile tuber3.57
Mother_GastroMother tuber of Gastrodia elata 2.45
Mother_JuvenMother tuber of Juvenile 2.28