Detail information of GWHGAAEX010798/evm.TU.scaffold_32.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743839164|ref|XP_010936924.1|5.51E-156PREDICTED: nodulation-signaling pathway 1 protein [Elaeis guineensis]
Swissprottr|Q4VYC8|NSP1_MEDTR5.00E-124Nodulation-signaling pathway 1 protein
trEMBLtr|A0A067L8A6|A0A067L8A6_JATCU4.00E-136Uncharacterized protein {ECO:0000313|EMBL:KDP40700.1}
TAIRAT3G138401.00E-104GRAS family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003240032184004895-
Transcript Sequence

Network for GWHGAAEX010798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS1214531.50E-50
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.760
SRR2545915Juvenile tuber2.150
SRP108465SRR5643513five period of Gastrodia elata48.870
SRR5643514five period of Gastrodia elata19.180
SRR5643515five period of Gastrodia elata17.580
SRR5643524five period of Gastrodia elata26.580
SRR5643525five period of Gastrodia elata1.760
SRR5643528five period of Gastrodia elata0.780
SRR5643658five period of Gastrodia elata0.660
SRR5643659five period of Gastrodia elata11.060
SRR5643660five period of Gastrodia elata10.710
SRR5643661five period of Gastrodia elata12.650
SRR5643662five period of Gastrodia elata12.280
SRR5643663five period of Gastrodia elata4.890
SRR5643664five period of Gastrodia elata24.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.440
SRR6049655Rhizomagastrodiae_C368-T10_good_164.480
SRR6049656Rhizomagastrodiae_C368-T07_good_168.350
SRR6049657Rhizomagastrodiae_C368-T07_good_186.230
SRR6049658Rhizomagastrodiae_C368-T04_good_1115.220
SRR6049659Rhizomagastrodiae_C368-T04_good_1123.230
SRR6049660Rhizomagastrodiae_C368-T01_good_141.740
SRR6049661Rhizomagastrodiae_C368-T04_good_185.910
SRR6049662Rhizomagastrodiae_C368-T01_good_136.080
SRR6049663Rhizomagastrodiae_C368-T01_good_122.580
SRR6049664Rhizomagastrodiae_C368-T10_good_193.530
SRR6049665Rhizomagastrodiae_C368-T10_good_193.530
SRP279888GastroGastrodia elata tuber 3.92
JuvenJuvenile tuber43.66
Mother_GastroMother tuber of Gastrodia elata 1.40
Mother_JuvenMother tuber of Juvenile 13.41