Gene detail

Detail information of GWHGAAEX010814/evm.TU.scaffold_323.4

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521462574\|ref\|YP_008149444.1\|	7.00E-41	hypothetical protein SCE1572_15050 [Sorangium cellulosum So0157-2]
KOG	KOG0061	0	Transporter, ABC superfamily (Breast cancer resistance protein)
nr	gi\|695031150\|ref\|XP_009403077.1\|	0	PREDICTED: ABC transporter G family member 11-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8RXN0\|AB11G_ARATH	0	ABC transporter G family member 11
trEMBL	tr\|V4SL47\|V4SL47_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR39590.1}
TAIR	AT1G17840	0	white-brown complex homolog protein 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000318	93929	104220	-

Transcript Sequence
>GWHTAAEX010814 AAGGTAAGAGCACGTGTCCTTCGTAACATGGCTTCTGCGTACGGCAACACCCCGTTGCCGGTATCGGGGGACTCTTTTCCGGTGACGCCACCTGATGACCGGAATATGACGTTTTGGCGGATGAACACTTGGTCTAGGCTCAACGAATCGCCGACGGAGCTGCAGCCGAGCGTGAACCGGCCCAAGCAGAAAGACGTTCCGGTCTACCTCACATGGGAGAATCTGTGGGTGACTGCGACCGGCCGAGACGGTTCGACCCACACAGTCCTCTCCGGCCTGACCGGCTTCGCCCGGCCCGCTGAGGTTCTTGCCATCATGGGTCCCTCCGGCTGCGGAAAAACCACTCTCCTCGATGTTCTTGCAGGGAGACTTACCTCTCGAATGACCAAATCAGGCACCATTCATATAAACGGTCAAAAGCAAGCGCTGTCGTACGGAACGTCGGCATACGTCACACAAGAGGACGTACTGCTGACAACCCTAACAGTCAGAGAGGCGATCTACTACTCGGCAGAGCTTCTGCTCCCCGAATCAATGTCCAGATCTCAAAAGAGGAAGAGAGCTGACACGGTGATAATGGAGATGGGCTTGCAGAGTGCAATGGATATTAGAATTGGGGGAAGGAATAGCAAAGGCATCAGTGGGGGACAGAGGAGGAGAGTCAGCATCTGCATAGAGATCCTAACCCGTCCTAAGCTCCTTTTCCTCGATGAGCCCACCAGCGGGCTAGACAGCGCCGCATCTTACCACGTGATGAGCAGGATTGTGAACCAAGCGCAGCAACACGGCGGCACCGTCATTGCCTCCATACATCAGCCGAGCTCCGAAGTGTTCGCCCTCTTCAACAATCTCTACCTTTTGTGCGCTGGCAAAACCATATTTTTCGGCCCAACTTCCTCAACTGCAGAGTTCTTTGCAAGCAGCGGCTTTCCTTGTCGACAACTGAGAAATCCTTCCGACCATTTTCTTCGAACAATTAACAAAGACTTTGATGCAGTAGATCCGGTGGTCGACCATTTAAGAGTTGACAATGCTGTCGGTATAGCTAATACGGCTGAAGCTATTGACACTCTGATTGAATCGTACAAATCGTCAAATATTTGCCGAGATGTGAAAAGGCAAGTGGCCGAGATAGGCAAAAGGGGAGGAATGTTGGTGACGAAAGAGCAAGCCAAGTTTATTACTCAATGCGCGGTTCTTACAAAGAGGTCCTTCACAAACATGACAAGAGATATAGGCTACTACTGGCTTAGGCTAGCAATCTATATTGTTCTTGGTCTGAGCATTGGAACAGTTTTCTATAATCTTGGAAATGAATACAGCTCCATTCAGGCCAGAGGTGCAATGTTGGCTTACACTGGCGGGTATCTCACTTTCATGGCAATAGGTGGATTTCCATCCTTTGTAGAGGATCTCAAGATATTCTATAGAGAGCAGCTTAACGGGCATTATGGGACCGGTTCATTCATCATTGCAAACTCAATCTCATCAACACCCTTCCTTTTGTTGATCACCTTCGTCCCTGCAGTCATTGCCTACTACCTCGCTGGTCTTCAGAGAAGTCCGGGGCACTTCATTTTCTTCTGTTTAATACTTTACTCAAGCATGCTCCTAGTAGAAAGCCTCATGATGATAATTGCAACCCTTGTTCCCGACTTCCTCATGGGCATCATCACAGGAGCCGGCATTCAGGGGTTGATGCTATTAGCCTGCGGCTTTTATCAATTGCCGAACGCCTTGCCGAAACCAGTGTGGACCTATCCCGGTTACTACATTGCCTTCCAGAGATTCACATACCAAGGATCCTACAAGAATGAGTACTATGGGTTGACATTTCCAAGTAGTGATGGGAATTCTACGATTTCTGGAACCGAGATTGTGAGAGATGTTTGGCAGATGCAAGTGGGCTATTCAAAGTGGGTGGATCTTATTGTCTTGATTGGGATGATTGTTTTTTACAGGTTCGCGTTCTGGGCAGCAATTAAAATTCGGGAGGAACTGAAGGTTCGAAATCTCGAACTTTTCAAGAAGAAAACTAGGGTTATGGAGATGTCGTCACTTCACTCCCGTGAGAATAATAGCAACGAACGAATTGACACCGTAGAAGAAGTCTAGAGTGCAGATGAGAATATATGATTTCAATGAATTTGTATCATAAATGTTTAGAAGGCAGGTAAAGATTGAGGGCTACGAGGATGTCGTTGGATGCATCTTCTTATTCTTCTAAATAAAATTTATAAACATATTGGCATACATTCGTAAAGATTAGTGTGAATCTACAAATTACTATATATCTCTTTTTGGTTCAGAGTGAGTTTAAGGATATTATATTCTTTCCTTTATCCAAGTAAAGAAGTGGTGAATAATTATGTTATTTGCTTAGTGATTTACTTTTGTGATCTATCAAACATTTTAAAATAAAAGTTATGTATAAACTTCATCCAGGTTTGTTGTAGCTATGCTCTAAAACTCTATATACAGAGGAATGCTACCACCCTCCTTTTACATGAAGA

Network for GWHGAAEX010814

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00005.26	ABC_tran	89	232	1.60E-24
PF01061.23	ABC2_membrane	386	597	2.60E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005524	Molecular Function	ATP binding
GO:0016887	Molecular Function	ATPase activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.690
SRP064423	SRR2545915	Juvenile tuber	3.230
SRP108465	SRR5643513	five period of Gastrodia elata	74.830
	SRR5643514	five period of Gastrodia elata	1.210
	SRR5643515	five period of Gastrodia elata	33.320
	SRR5643524	five period of Gastrodia elata	4.850
	SRR5643525	five period of Gastrodia elata	1.660
	SRR5643528	five period of Gastrodia elata	1.480
	SRR5643658	five period of Gastrodia elata	2.090
	SRR5643659	five period of Gastrodia elata	3.030
	SRR5643660	five period of Gastrodia elata	2.100
	SRR5643661	five period of Gastrodia elata	4.660
	SRR5643662	five period of Gastrodia elata	2.120
	SRR5643663	five period of Gastrodia elata	2.840
	SRR5643664	five period of Gastrodia elata	1.920
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	89.460
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	143.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	123.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	49.580
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	86.280
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	68.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	44.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.760
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.510
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	223.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	223.730
SRP279888	Gastro	Gastrodia elata tuber	2.03
	Juven	Juvenile tuber	7.71
	Mother_Gastro	Mother tuber of Gastrodia elata	18.01
	Mother_Juven	Mother tuber of Juvenile	19.36