Detail information of GWHGAAEX010819/evm.TU.scaffold_324.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG09223.00E-11DEAH-box RNA helicase
nrgi|743942891|ref|XP_011015947.1|2.87E-11PREDICTED: putative ATP-dependent RNA helicase DHX33 [Populus euphratica]
trEMBLtr|A0A0A0L7N3|A0A0A0L7N3_CUCSA1.00E-11Uncharacterized protein {ECO:0000313|EMBL:KGN56131.1}
TAIRAT1G263703.00E-11RNA helicase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000317186488197896+
Transcript Sequence

Network for GWHGAAEX010819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12818DHX8, PRP22 Spliceosome map03040

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.480
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.750
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.490
SRR5643658five period of Gastrodia elata0.370
SRR5643659five period of Gastrodia elata1.130
SRR5643660five period of Gastrodia elata0.850
SRR5643661five period of Gastrodia elata0.420
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.320
SRR5643664five period of Gastrodia elata0.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.690
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_13.130
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.41
JuvenJuvenile tuber2.06
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 2.31