Gene detail

Detail information of GWHGAAEX010825/evm.TU.scaffold_325.5

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743831124\|ref\|XP_010934594.1\|	PREDICTED: probable methyltransferase PMT17 [Elaeis guineensis]
Swissprot	tr\|Q9SZX8\|PMTH_ARATH	Probable methyltransferase PMT17
trEMBL	tr\|J3MAI3\|J3MAI3_ORYBR	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB06G10270.1}
TAIR	AT4G10440	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000321	153567	170610	-

Transcript Sequence
>GWHTAAEX010825 TAAAATATACTTTTGCTTCCTAATTACTCTTTCCTAATCCCTCTCACGCTCTGTTCTGTAACTTTCTTAAGGTGCACAAACCGTAGGGAAGAGTTTATTATAATTATCATTATTATGGCTATCATAATGATGGTTTTTTTTGTAATCCGCTTGAGAAGAAGGGAAGAATCGCAGAAGGCGAGGATTTGCTAAACTGGTTGTATCTTCATTTTTGTTTGTCTTGAACAGGTTTTGTCTCATAGTTTATATTCTTATGCCGTATTTATCCTTCTGCTTTTATCTGCTCGTTTTCTTTGTTCCCGTGTCTTTATTGTTATTAAATTTATTTCTACATTAGCTATCATTTTTTTGCTCCTTGTTTTGCTGTTGTTATGCTTTGGCTATTTCGGTAGGTGATCAAAATCCCTCTTTTGTTACCAAGTTCACTATTTTCTTAGTTGGTGCCAATATCTTTTTTTCTGCTCTTTAGGCTGAATGATTTCTTGATCATGAATTGTAAGCATCTCTTTAAGAAGGCTATGATGGAAAATGGGACTGTTAAGATTTTCAAGATGGAATCTAGAAGAAAGGCCATCACTTGGATATTAGCCATAACAAGTGTTTGCACAACGTCCTACCTTTTTGGTGTCTGGCAAAGCACAAGAACTGCCATCTATTTAAGTTCAATAAACTCTGATGGTGAGTCGAATAAGATTGGCTGCTCCAATCCACAGTCACTTGACTTTCGAGCTCACCACCAAGTTGGCTTGAATGACTCATCATCACTCTCTAGTGAGAAATTTCATGCTTGTTTCATCAAGTATAGTGAGTACACGCCTTGTCAAGATCCAAGGAGGGCAAGGAAGTTTCCAAAGAACATGCTGGTATATCGAGAGCGGCATTGTCCTGAGAAGAAGGATCTCCTAAATTGCCTGATCCCTGCCCCTCCCAAGTACAAGAACCCCTTTAAGTGGCCTCAAAGTAGAGACTATGCTTGGTATGATAACATACCCCACAAAGAACTGAGCATTGAGAAAGCGGTCCAGAATTGGATCCAAGTGGAGGGCGATAGGTTTTGGTTCCCGGGTGGAGGAACAATGTTTCCTAGGGGAGCTGATTCTTACATAGATGACATTGATGCTCTTAATTCTTTAAATGATGGAAGTATTAGGACTGCTCTTGACACTGGTTGTGGGGTTGCAAGCTGGGGAGCCTATCTTCTCAAGAGAGACATATTAACTATGTCCTTTGCTCCAAGGGACTCTCATGAAGCTCAAGTGCAGTTTGCATTAGAAAGAGGGGTCCCGGCGATGATTGGTGTGATGGCATCAGATAGAATTCCTTACCCTGCGAGGGCTTTTGATATGGCTCATTGTTCACGGTGCTTGATTCCGTGGCAGCTTTTTGATGGCCTTTATCTATTGGAACTCGATAGAGTATTGAGACCAGGAGGCTACTGGATACTCTCAGGCCCTCCTATTAATTGGAAGACACACTATAAAGGATGGGAGAGAACTGAAGAAGATTTAAAGCGTGAACAAAACTCTATAGAGGATATGGCTAAACGATTATGCTGGAGAAAGTTGATTGAGCAAGGTGATCTTGCGATATGGCAAAAGCCCATCAACCACGTTGAATGTATAGAAAGTCGAAAGATCTACAAAACACCGCCCATGTGCCAGAATGATAGCTCAGATTCAGCATGGTACAGAAAAATGGAAGTTTGCATTACCCGATTACCGAAAGTCAACAATTTGAAAGAAGTTTCTGGCGGTGATGTGGAGAAATGGCCAGCCCGGGCATTTATATTGCCTCCCAGGATCAGCAGGGGTACTATCCCAGGTCTCACACTCGAGAAATTTGATGAGGATAACAAGATGTGGAAGGAAAGGGTTGCACATTACAAGAGAATCCTACAACCTTTGGGTGATGGAAGGTTCCGAAATGTACTTGACATGAATGCCAATATGGGCGGATTTGCAGCCGCATTGATGGAATTTCCTGTTTGGGTGATGAATGTTGTACCCGCTAACTCTAAACCCGACACACTTGGTGTTATCTATGAGAGAGGTTTTATCGGCACATACCAAGATTGGTGTGAGCCTTTCTCAACTTATCCAAGGACTTATGATCTCATTCATGCTGGCGATATTTTCAACATGTACCAAGATAGGTGTGACATCACATACATTCTGTTGGAGATGGACAGAATTTTAAGACCAGAAGGCACAGTTATATTCAGGGATGATGTGGAGATCCTTTTTAAGATCAAAAGTCTAACTGATCGGATGAGATGGAAGAGCATGATTAAGGATCATGAGAGTGGGCCTTTCAACCCTGAAAAGATCTTGCTGGCGGTTAAGACCTATTGGACTGGTGAACCATCATCCCAGGCATAATAAGACAGGTCTTTATGCCTTGTTTGGAGCAGTTCATGTTTTTTCTGCTTTTAAAAGCTGATTCTACTTTTTCAAACGCAAACAGAAATTGTTGCTTTTCCCACAACAAAATGCTGCAAAAATGTAATACCAAAGAAAGGCTTTTTACACAATACTTTTAGATTTAAATGTAAATAGACAATCATTTGAATGCTGAAAGATAAAGGATGAATTGAATTGATATCCCGAGTGAATTCAATCTTTTTTTTTGTACCATCACACTCTTATGATCTTTATGTGATAAGGTAAAATGATTGTGTTGGTTTTTTTTT

Network for GWHGAAEX010825

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03141.15	Methyltransf_29	107	618	1.80E-224

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	31.070
SRP064423	SRR2545915	Juvenile tuber	14.840
SRP108465	SRR5643513	five period of Gastrodia elata	26.820
	SRR5643514	five period of Gastrodia elata	39.380
	SRR5643515	five period of Gastrodia elata	24.990
	SRR5643524	five period of Gastrodia elata	45.680
	SRR5643525	five period of Gastrodia elata	53.480
	SRR5643528	five period of Gastrodia elata	39.280
	SRR5643658	five period of Gastrodia elata	59.540
	SRR5643659	five period of Gastrodia elata	13.630
	SRR5643660	five period of Gastrodia elata	16.530
	SRR5643661	five period of Gastrodia elata	11.190
	SRR5643662	five period of Gastrodia elata	12.020
	SRR5643663	five period of Gastrodia elata	15.470
	SRR5643664	five period of Gastrodia elata	16.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.610
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.680
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	24.090
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.740
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.800
SRP279888	Gastro	Gastrodia elata tuber	45.90
	Juven	Juvenile tuber	32.92
	Mother_Gastro	Mother tuber of Gastrodia elata	48.83
	Mother_Juven	Mother tuber of Juvenile	34.83