Detail information of GWHGAAEX010834/evm.TU.scaffold_328.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17251.00E-78Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
nrgi|672115386|ref|XP_008780664.1|8.72E-94PREDICTED: HVA22-like protein a isoform X1 [Phoenix dactylifera]
Swissprottr|Q9S7V4|HA22A_ARATH4.00E-79HVA22-like protein a
trEMBLtr|M0T5W7|M0T5W7_MUSAM2.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P10680_001}
TAIRAT1G745201.00E-78HVA22 homologue A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000330138495155798+
Transcript Sequence

Network for GWHGAAEX010834

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03134.18TB2_DP1_HVA22271031.30E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.290
SRR2545915Juvenile tuber38.320
SRP108465SRR5643513five period of Gastrodia elata40.230
SRR5643514five period of Gastrodia elata49.100
SRR5643515five period of Gastrodia elata42.280
SRR5643524five period of Gastrodia elata41.970
SRR5643525five period of Gastrodia elata34.210
SRR5643528five period of Gastrodia elata39.080
SRR5643658five period of Gastrodia elata32.370
SRR5643659five period of Gastrodia elata41.040
SRR5643660five period of Gastrodia elata35.350
SRR5643661five period of Gastrodia elata34.160
SRR5643662five period of Gastrodia elata31.860
SRR5643663five period of Gastrodia elata33.600
SRR5643664five period of Gastrodia elata27.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.330
SRR6049655Rhizomagastrodiae_C368-T10_good_130.890
SRR6049656Rhizomagastrodiae_C368-T07_good_144.320
SRR6049657Rhizomagastrodiae_C368-T07_good_128.530
SRR6049658Rhizomagastrodiae_C368-T04_good_127.660
SRR6049659Rhizomagastrodiae_C368-T04_good_122.240
SRR6049660Rhizomagastrodiae_C368-T01_good_132.280
SRR6049661Rhizomagastrodiae_C368-T04_good_124.930
SRR6049662Rhizomagastrodiae_C368-T01_good_148.480
SRR6049663Rhizomagastrodiae_C368-T01_good_142.240
SRR6049664Rhizomagastrodiae_C368-T10_good_155.800
SRR6049665Rhizomagastrodiae_C368-T10_good_155.800
SRP279888GastroGastrodia elata tuber 32.97
JuvenJuvenile tuber48.03
Mother_GastroMother tuber of Gastrodia elata 33.02
Mother_JuvenMother tuber of Juvenile 23.24