Detail information of GWHGAAEX010840/evm.TU.scaffold_33.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|3.00E-22serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06981.00E-155Serine/threonine protein phosphatase
nrgi|743803880|ref|XP_010927050.1|1.06E-165PREDICTED: probable protein phosphatase 2C 59 [Elaeis guineensis]
Swissprottr|Q8RXV3|P2C59_ARATH6.00E-161Probable protein phosphatase 2C 59
trEMBLtr|A0A067KEP1|A0A067KEP1_JATCU2.00E-164Uncharacterized protein {ECO:0000313|EMBL:KDP33478.1}
TAIRAT5G249401.00E-155Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000044130696138322-
Transcript Sequence

Network for GWHGAAEX010840

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C602703.70E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.320
SRR2545915Juvenile tuber28.550
SRP108465SRR5643513five period of Gastrodia elata26.830
SRR5643514five period of Gastrodia elata24.460
SRR5643515five period of Gastrodia elata25.280
SRR5643524five period of Gastrodia elata23.520
SRR5643525five period of Gastrodia elata39.760
SRR5643528five period of Gastrodia elata36.460
SRR5643658five period of Gastrodia elata44.320
SRR5643659five period of Gastrodia elata23.310
SRR5643660five period of Gastrodia elata22.280
SRR5643661five period of Gastrodia elata24.040
SRR5643662five period of Gastrodia elata20.230
SRR5643663five period of Gastrodia elata20.390
SRR5643664five period of Gastrodia elata20.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.420
SRR6049655Rhizomagastrodiae_C368-T10_good_113.660
SRR6049656Rhizomagastrodiae_C368-T07_good_124.060
SRR6049657Rhizomagastrodiae_C368-T07_good_126.740
SRR6049658Rhizomagastrodiae_C368-T04_good_133.170
SRR6049659Rhizomagastrodiae_C368-T04_good_132.770
SRR6049660Rhizomagastrodiae_C368-T01_good_126.730
SRR6049661Rhizomagastrodiae_C368-T04_good_129.950
SRR6049662Rhizomagastrodiae_C368-T01_good_123.650
SRR6049663Rhizomagastrodiae_C368-T01_good_127.760
SRR6049664Rhizomagastrodiae_C368-T10_good_126.870
SRR6049665Rhizomagastrodiae_C368-T10_good_126.870
SRP279888GastroGastrodia elata tuber 27.70
JuvenJuvenile tuber22.88
Mother_GastroMother tuber of Gastrodia elata 79.46
Mother_JuvenMother tuber of Juvenile 34.20