Detail information of GWHGAAEX010846/evm.TU.scaffold_33.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|589912864|gb|AHL24648.1|1.19E-137WRKY transcription factor [Dendrobium catenatum]
Swissprottr|Q9SV15|WRK11_ARATH4.00E-95Probable WRKY transcription factor 11
trEMBLtr|F6H9I7|F6H9I7_VITVI1.00E-112Putative uncharacterized protein {ECO:0000313|EMBL:CCB48880.1}
TAIRAT4G315502.00E-93WRKY DNA-binding protein 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000044317488319342+
Transcript Sequence

Network for GWHGAAEX010846

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10533.8Plant_zn_clust1572057.30E-21
PF03106.14WRKY2082653.60E-27
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.680
SRR2545915Juvenile tuber10.010
SRP108465SRR5643513five period of Gastrodia elata3.270
SRR5643514five period of Gastrodia elata5.550
SRR5643515five period of Gastrodia elata9.630
SRR5643524five period of Gastrodia elata3.380
SRR5643525five period of Gastrodia elata11.090
SRR5643528five period of Gastrodia elata15.870
SRR5643658five period of Gastrodia elata11.160
SRR5643659five period of Gastrodia elata9.770
SRR5643660five period of Gastrodia elata3.460
SRR5643661five period of Gastrodia elata8.170
SRR5643662five period of Gastrodia elata8.300
SRR5643663five period of Gastrodia elata5.070
SRR5643664five period of Gastrodia elata10.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.820
SRR6049655Rhizomagastrodiae_C368-T10_good_129.550
SRR6049656Rhizomagastrodiae_C368-T07_good_125.710
SRR6049657Rhizomagastrodiae_C368-T07_good_116.010
SRR6049658Rhizomagastrodiae_C368-T04_good_115.860
SRR6049659Rhizomagastrodiae_C368-T04_good_119.080
SRR6049660Rhizomagastrodiae_C368-T01_good_132.350
SRR6049661Rhizomagastrodiae_C368-T04_good_114.610
SRR6049662Rhizomagastrodiae_C368-T01_good_119.320
SRR6049663Rhizomagastrodiae_C368-T01_good_125.830
SRR6049664Rhizomagastrodiae_C368-T10_good_123.070
SRR6049665Rhizomagastrodiae_C368-T10_good_123.070
SRP279888GastroGastrodia elata tuber 2.02
JuvenJuvenile tuber8.99
Mother_GastroMother tuber of Gastrodia elata 11.67
Mother_JuvenMother tuber of Juvenile 4.02