Detail information of GWHGAAEX010855/evm.TU.scaffold_33.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|89894414|ref|YP_517901.1|2.00E-25hypothetical protein DSY1668 [Desulfitobacterium hafniense Y51]
KOGKOG10514.00E-29Chaperone HSP104 and related ATP-dependent Clp proteases
nrgi|568884133|ref|XP_006494775.1|6.68E-31PREDICTED: chaperone protein ClpB1-like isoform X1 [Citrus sinensis]
Swissprottr|Q6F2Y7|CLPB1_ORYSJ2.00E-31Chaperone protein ClpB1
trEMBLtr|I1MT57|I1MT57_SOYBN9.00E-31Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G08540.1}
TAIRAT1G743104.00E-29heat shock protein 101

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000044552858553365+
Transcript Sequence

Network for GWHGAAEX010855

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03695clpB Longevity regulating pathway - multiple species map04213

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.960
SRR2545915Juvenile tuber0.540
SRP108465SRR5643513five period of Gastrodia elata2.740
SRR5643514five period of Gastrodia elata1.080
SRR5643515five period of Gastrodia elata2.530
SRR5643524five period of Gastrodia elata1.060
SRR5643525five period of Gastrodia elata3.000
SRR5643528five period of Gastrodia elata1.430
SRR5643658five period of Gastrodia elata1.090
SRR5643659five period of Gastrodia elata1.070
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.650
SRR5643663five period of Gastrodia elata0.460
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_11.110
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_12.810
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.930
SRR6049660Rhizomagastrodiae_C368-T01_good_10.720
SRR6049661Rhizomagastrodiae_C368-T04_good_11.770
SRR6049662Rhizomagastrodiae_C368-T01_good_12.680
SRR6049663Rhizomagastrodiae_C368-T01_good_11.960
SRR6049664Rhizomagastrodiae_C368-T10_good_11.980
SRR6049665Rhizomagastrodiae_C368-T10_good_11.980
SRP279888GastroGastrodia elata tuber 1.19
JuvenJuvenile tuber1.32
Mother_GastroMother tuber of Gastrodia elata 3.08
Mother_JuvenMother tuber of Juvenile 0.82