Detail information of GWHGAAEX010859/evm.TU.scaffold_33.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694902|ref|YP_008797956.1|9.00E-10ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG04237.00E-110Ubiquitin-protein ligase
nrgi|672132048|ref|XP_008789598.1|2.41E-121PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Phoenix dactylifera]
Swissprottr|Q9FF66|UBC22_ARATH2.00E-110Ubiquitin-conjugating enzyme E2 22
trEMBLtr|I1HXU6|I1HXU6_BRADI2.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G05680.1}
TAIRAT5G050807.00E-110ubiquitin-conjugating enzyme 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000044833194840493-
Transcript Sequence

Network for GWHGAAEX010859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con151509.70E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10583UBE2S, E2EPF Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms141.610
SRR2545915Juvenile tuber139.220
SRP108465SRR5643513five period of Gastrodia elata65.720
SRR5643514five period of Gastrodia elata67.030
SRR5643515five period of Gastrodia elata69.200
SRR5643524five period of Gastrodia elata68.880
SRR5643525five period of Gastrodia elata51.280
SRR5643528five period of Gastrodia elata49.520
SRR5643658five period of Gastrodia elata52.660
SRR5643659five period of Gastrodia elata86.120
SRR5643660five period of Gastrodia elata93.850
SRR5643661five period of Gastrodia elata98.110
SRR5643662five period of Gastrodia elata81.080
SRR5643663five period of Gastrodia elata80.740
SRR5643664five period of Gastrodia elata79.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.220
SRR6049655Rhizomagastrodiae_C368-T10_good_196.920
SRR6049656Rhizomagastrodiae_C368-T07_good_183.680
SRR6049657Rhizomagastrodiae_C368-T07_good_196.670
SRR6049658Rhizomagastrodiae_C368-T04_good_187.460
SRR6049659Rhizomagastrodiae_C368-T04_good_191.590
SRR6049660Rhizomagastrodiae_C368-T01_good_191.440
SRR6049661Rhizomagastrodiae_C368-T04_good_180.930
SRR6049662Rhizomagastrodiae_C368-T01_good_175.230
SRR6049663Rhizomagastrodiae_C368-T01_good_189.820
SRR6049664Rhizomagastrodiae_C368-T10_good_190.680
SRR6049665Rhizomagastrodiae_C368-T10_good_190.680
SRP279888GastroGastrodia elata tuber 94.47
JuvenJuvenile tuber86.30
Mother_GastroMother tuber of Gastrodia elata 117.96
Mother_JuvenMother tuber of Juvenile 76.84