Detail information of GWHGAAEX010864/evm.TU.scaffold_33.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332796931|ref|YP_004458431.1|4.00E-1850S ribosomal protein L44E [Acidianus hospitalis W1]
KOGKOG34645.00E-6660S ribosomal protein L44
nrgi|41152660|gb|AAR99579.1|2.12E-6760S ribosomal protein L44 [Phalaenopsis hybrid cultivar]
Swissprottr|O23290|RL36A_ARATH2.00E-6660S ribosomal protein L36a
trEMBLtr|Q6RI22|Q6RI22_9ASPA8.00E-6860S ribosomal protein L44 {ECO:0000313|EMBL:AAR99579.1}
TAIRAT4G143205.00E-66Zinc-binding ribosomal protein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004410163671021710+
Transcript Sequence

Network for GWHGAAEX010864

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00935.18Ribosomal_L4419941.40E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02929RP-L44e, RPL44 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms154.630
SRR2545915Juvenile tuber198.400
SRP108465SRR5643513five period of Gastrodia elata388.970
SRR5643514five period of Gastrodia elata526.490
SRR5643515five period of Gastrodia elata420.100
SRR5643524five period of Gastrodia elata477.780
SRR5643525five period of Gastrodia elata174.750
SRR5643528five period of Gastrodia elata205.840
SRR5643658five period of Gastrodia elata152.670
SRR5643659five period of Gastrodia elata308.350
SRR5643660five period of Gastrodia elata281.990
SRR5643661five period of Gastrodia elata304.000
SRR5643662five period of Gastrodia elata224.110
SRR5643663five period of Gastrodia elata221.420
SRR5643664five period of Gastrodia elata220.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1289.380
SRR6049655Rhizomagastrodiae_C368-T10_good_1510.890
SRR6049656Rhizomagastrodiae_C368-T07_good_1327.360
SRR6049657Rhizomagastrodiae_C368-T07_good_1245.220
SRR6049658Rhizomagastrodiae_C368-T04_good_1258.420
SRR6049659Rhizomagastrodiae_C368-T04_good_1202.850
SRR6049660Rhizomagastrodiae_C368-T01_good_1286.900
SRR6049661Rhizomagastrodiae_C368-T04_good_1258.340
SRR6049662Rhizomagastrodiae_C368-T01_good_1447.290
SRR6049663Rhizomagastrodiae_C368-T01_good_1371.230
SRR6049664Rhizomagastrodiae_C368-T10_good_1508.770
SRR6049665Rhizomagastrodiae_C368-T10_good_1508.770
SRP279888GastroGastrodia elata tuber 339.93
JuvenJuvenile tuber346.41
Mother_GastroMother tuber of Gastrodia elata 236.42
Mother_JuvenMother tuber of Juvenile 224.68