Detail information of GWHGAAEX010869/evm.TU.scaffold_33.44
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284030326|ref|YP_003380257.1| | 2.00E-114 | protease-associated PA domain-containing protein [Kribbella flavida DSM 17836] |
| nr | gi|743804559|ref|XP_010927222.1| | 0 | PREDICTED: subtilisin-like protease isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O65351|SUBL_ARATH | 1.00E-105 | Subtilisin-like protease (Precursor) |
| trEMBL | tr|M0U049|M0U049_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P13910_001} |
| TAIR | AT4G30020 | 0 | PA-domain containing subtilase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000044 | 1189216 | 1219214 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010869
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05922.15 | Inhibitor_I9 | 25 | 128 | 6.60E-19 |
| PF00082.21 | Peptidase_S8 | 155 | 643 | 1.60E-50 |
| PF06280.11 | fn3_5 | 727 | 811 | 2.10E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.840 |
| SRR2545915 | Juvenile tuber | 41.290 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 65.430 |
| SRR5643514 | five period of Gastrodia elata | 66.700 | |
| SRR5643515 | five period of Gastrodia elata | 63.180 | |
| SRR5643524 | five period of Gastrodia elata | 61.480 | |
| SRR5643525 | five period of Gastrodia elata | 68.680 | |
| SRR5643528 | five period of Gastrodia elata | 69.280 | |
| SRR5643658 | five period of Gastrodia elata | 86.810 | |
| SRR5643659 | five period of Gastrodia elata | 35.530 | |
| SRR5643660 | five period of Gastrodia elata | 30.280 | |
| SRR5643661 | five period of Gastrodia elata | 31.230 | |
| SRR5643662 | five period of Gastrodia elata | 26.830 | |
| SRR5643663 | five period of Gastrodia elata | 38.540 | |
| SRR5643664 | five period of Gastrodia elata | 24.560 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 49.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 63.510 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 54.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 39.990 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.580 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 47.890 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 43.280 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 77.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 58.450 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 67.960 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 67.960 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.88 |
| Juven | Juvenile tuber | 44.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 43.18 | |
| Mother_Juven | Mother tuber of Juvenile | 26.61 |