Detail information of GWHGAAEX010871/evm.TU.scaffold_33.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672163126|ref|XP_008801396.1|5.57E-99PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Phoenix dactylifera]
Swissprottr|Q9FLJ2|NC100_ARATH2.00E-73NAC domain-containing protein 100
trEMBLtr|M0TJ05|M0TJ05_MUSAM8.00E-97Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P19680_001}
TAIRAT2G244301.00E-79NAC domain containing protein 38

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004412658491279438+
Transcript Sequence

Network for GWHGAAEX010871

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM551821.20E-38
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms101.980
SRR2545915Juvenile tuber55.520
SRP108465SRR5643513five period of Gastrodia elata25.880
SRR5643514five period of Gastrodia elata10.270
SRR5643515five period of Gastrodia elata15.750
SRR5643524five period of Gastrodia elata8.910
SRR5643525five period of Gastrodia elata9.320
SRR5643528five period of Gastrodia elata5.780
SRR5643658five period of Gastrodia elata2.860
SRR5643659five period of Gastrodia elata20.320
SRR5643660five period of Gastrodia elata13.740
SRR5643661five period of Gastrodia elata14.050
SRR5643662five period of Gastrodia elata7.360
SRR5643663five period of Gastrodia elata6.900
SRR5643664five period of Gastrodia elata7.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.970
SRR6049655Rhizomagastrodiae_C368-T10_good_130.360
SRR6049656Rhizomagastrodiae_C368-T07_good_118.720
SRR6049657Rhizomagastrodiae_C368-T07_good_129.290
SRR6049658Rhizomagastrodiae_C368-T04_good_122.360
SRR6049659Rhizomagastrodiae_C368-T04_good_123.470
SRR6049660Rhizomagastrodiae_C368-T01_good_129.010
SRR6049661Rhizomagastrodiae_C368-T04_good_124.500
SRR6049662Rhizomagastrodiae_C368-T01_good_115.730
SRR6049663Rhizomagastrodiae_C368-T01_good_114.950
SRR6049664Rhizomagastrodiae_C368-T10_good_117.550
SRR6049665Rhizomagastrodiae_C368-T10_good_117.550
SRP279888GastroGastrodia elata tuber 11.11
JuvenJuvenile tuber61.38
Mother_GastroMother tuber of Gastrodia elata 39.79
Mother_JuvenMother tuber of Juvenile 161.14