Detail information of GWHGAAEX010886/evm.TU.scaffold_33.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|1.00E-35hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|566178812|ref|XP_006382216.1|0serine/threonine/tyrosine kinase family protein [Populus trichocarpa]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-96Serine/threonine-protein kinase HT1
trEMBLtr|A9PHL5|A9PHL5_POPTR0Serine/threonine/tyrosine kinase family protein {ECO:0000313|EMBL:ERP60013.1}
TAIRAT4G311700Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004417804721797824-
Transcript Sequence

Network for GWHGAAEX010886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr1363894.30E-67
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.720
SRR2545915Juvenile tuber27.220
SRP108465SRR5643513five period of Gastrodia elata34.230
SRR5643514five period of Gastrodia elata28.910
SRR5643515five period of Gastrodia elata31.280
SRR5643524five period of Gastrodia elata33.740
SRR5643525five period of Gastrodia elata45.950
SRR5643528five period of Gastrodia elata43.540
SRR5643658five period of Gastrodia elata41.980
SRR5643659five period of Gastrodia elata25.530
SRR5643660five period of Gastrodia elata28.950
SRR5643661five period of Gastrodia elata29.540
SRR5643662five period of Gastrodia elata29.740
SRR5643663five period of Gastrodia elata27.520
SRR5643664five period of Gastrodia elata33.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.300
SRR6049655Rhizomagastrodiae_C368-T10_good_130.420
SRR6049656Rhizomagastrodiae_C368-T07_good_130.970
SRR6049657Rhizomagastrodiae_C368-T07_good_132.940
SRR6049658Rhizomagastrodiae_C368-T04_good_133.100
SRR6049659Rhizomagastrodiae_C368-T04_good_136.550
SRR6049660Rhizomagastrodiae_C368-T01_good_133.210
SRR6049661Rhizomagastrodiae_C368-T04_good_128.330
SRR6049662Rhizomagastrodiae_C368-T01_good_131.110
SRR6049663Rhizomagastrodiae_C368-T01_good_131.100
SRR6049664Rhizomagastrodiae_C368-T10_good_136.240
SRR6049665Rhizomagastrodiae_C368-T10_good_136.240
SRP279888GastroGastrodia elata tuber 35.03
JuvenJuvenile tuber52.74
Mother_GastroMother tuber of Gastrodia elata 54.78
Mother_JuvenMother tuber of Juvenile 69.99