Detail information of GWHGAAEX010887/evm.TU.scaffold_33.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|4.00E-23hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01922.00E-148Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|566178812|ref|XP_006382216.1|8.58E-169serine/threonine/tyrosine kinase family protein [Populus trichocarpa]
Swissprottr|Q2MHE4|HT1_ARATH5.00E-54Serine/threonine-protein kinase HT1
trEMBLtr|A9PHL5|A9PHL5_POPTR3.00E-169Serine/threonine/tyrosine kinase family protein {ECO:0000313|EMBL:ERP60013.1}
TAIRAT4G311702.00E-148Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004418416101842758+
Transcript Sequence

Network for GWHGAAEX010887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr1343023.30E-38
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.440
SRR2545915Juvenile tuber21.240
SRP108465SRR5643513five period of Gastrodia elata29.240
SRR5643514five period of Gastrodia elata28.000
SRR5643515five period of Gastrodia elata27.530
SRR5643524five period of Gastrodia elata30.430
SRR5643525five period of Gastrodia elata39.120
SRR5643528five period of Gastrodia elata32.830
SRR5643658five period of Gastrodia elata34.620
SRR5643659five period of Gastrodia elata30.040
SRR5643660five period of Gastrodia elata32.770
SRR5643661five period of Gastrodia elata31.970
SRR5643662five period of Gastrodia elata39.150
SRR5643663five period of Gastrodia elata32.390
SRR5643664five period of Gastrodia elata34.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.770
SRR6049655Rhizomagastrodiae_C368-T10_good_123.740
SRR6049656Rhizomagastrodiae_C368-T07_good_124.860
SRR6049657Rhizomagastrodiae_C368-T07_good_128.360
SRR6049658Rhizomagastrodiae_C368-T04_good_122.590
SRR6049659Rhizomagastrodiae_C368-T04_good_124.290
SRR6049660Rhizomagastrodiae_C368-T01_good_124.420
SRR6049661Rhizomagastrodiae_C368-T04_good_122.430
SRR6049662Rhizomagastrodiae_C368-T01_good_126.390
SRR6049663Rhizomagastrodiae_C368-T01_good_125.090
SRR6049664Rhizomagastrodiae_C368-T10_good_125.610
SRR6049665Rhizomagastrodiae_C368-T10_good_125.610
SRP279888GastroGastrodia elata tuber 31.73
JuvenJuvenile tuber44.04
Mother_GastroMother tuber of Gastrodia elata 26.96
Mother_JuvenMother tuber of Juvenile 32.44