Detail information of GWHGAAEX010888/evm.TU.scaffold_33.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743767114|ref|XP_010913808.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 6-like [Elaeis guineensis]
Swissprottr|Q93Z08|E136_ARATH0Glucan endo-1,3-beta-glucosidase 6 (Precursor)
trEMBLtr|M0SIE0|M0SIE0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P27740_001}
TAIRAT5G580900O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004418629201865578+
Transcript Sequence

Network for GWHGAAEX010888

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17273429.20E-79
PF07983.12X83614301.60E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19893GN5_6 Metabolic pathways map01100
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.000
SRR2545915Juvenile tuber2.420
SRP108465SRR5643513five period of Gastrodia elata2.310
SRR5643514five period of Gastrodia elata2.630
SRR5643515five period of Gastrodia elata1.960
SRR5643524five period of Gastrodia elata2.840
SRR5643525five period of Gastrodia elata4.880
SRR5643528five period of Gastrodia elata2.540
SRR5643658five period of Gastrodia elata2.650
SRR5643659five period of Gastrodia elata2.600
SRR5643660five period of Gastrodia elata1.690
SRR5643661five period of Gastrodia elata1.750
SRR5643662five period of Gastrodia elata2.970
SRR5643663five period of Gastrodia elata1.930
SRR5643664five period of Gastrodia elata1.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.830
SRR6049655Rhizomagastrodiae_C368-T10_good_14.470
SRR6049656Rhizomagastrodiae_C368-T07_good_12.970
SRR6049657Rhizomagastrodiae_C368-T07_good_12.850
SRR6049658Rhizomagastrodiae_C368-T04_good_11.770
SRR6049659Rhizomagastrodiae_C368-T04_good_11.620
SRR6049660Rhizomagastrodiae_C368-T01_good_12.010
SRR6049661Rhizomagastrodiae_C368-T04_good_12.810
SRR6049662Rhizomagastrodiae_C368-T01_good_14.390
SRR6049663Rhizomagastrodiae_C368-T01_good_12.460
SRR6049664Rhizomagastrodiae_C368-T10_good_13.370
SRR6049665Rhizomagastrodiae_C368-T10_good_13.370
SRP279888GastroGastrodia elata tuber 2.72
JuvenJuvenile tuber1.54
Mother_GastroMother tuber of Gastrodia elata 2.13
Mother_JuvenMother tuber of Juvenile 0.89