Detail information of GWHGAAEX010892/evm.TU.scaffold_33.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695078634|ref|XP_009386709.1|2.95E-48PREDICTED: ethylene-responsive transcription factor RAP2-1-like [Musa acuminata subsp. malaccensis]
Swissprottr|O22174|ERF08_ARATH1.00E-39Ethylene-responsive transcription factor ERF008
trEMBLtr|F6H1A8|F6H1A8_VITVI4.00E-48Putative uncharacterized protein {ECO:0000313|EMBL:CCB45817.1}
TAIRAT2G233404.00E-39DREB and EAR motif protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004420298512031947-
Transcript Sequence

Network for GWHGAAEX010892

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP232802.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.260
SRR2545915Juvenile tuber8.920
SRP108465SRR5643513five period of Gastrodia elata15.390
SRR5643514five period of Gastrodia elata12.290
SRR5643515five period of Gastrodia elata19.500
SRR5643524five period of Gastrodia elata7.700
SRR5643525five period of Gastrodia elata108.230
SRR5643528five period of Gastrodia elata73.820
SRR5643658five period of Gastrodia elata106.540
SRR5643659five period of Gastrodia elata6.580
SRR5643660five period of Gastrodia elata3.130
SRR5643661five period of Gastrodia elata5.530
SRR5643662five period of Gastrodia elata23.230
SRR5643663five period of Gastrodia elata9.780
SRR5643664five period of Gastrodia elata107.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.430
SRR6049655Rhizomagastrodiae_C368-T10_good_124.800
SRR6049656Rhizomagastrodiae_C368-T07_good_124.120
SRR6049657Rhizomagastrodiae_C368-T07_good_135.910
SRR6049658Rhizomagastrodiae_C368-T04_good_150.990
SRR6049659Rhizomagastrodiae_C368-T04_good_179.310
SRR6049660Rhizomagastrodiae_C368-T01_good_157.740
SRR6049661Rhizomagastrodiae_C368-T04_good_147.320
SRR6049662Rhizomagastrodiae_C368-T01_good_112.920
SRR6049663Rhizomagastrodiae_C368-T01_good_134.800
SRR6049664Rhizomagastrodiae_C368-T10_good_117.320
SRR6049665Rhizomagastrodiae_C368-T10_good_117.320
SRP279888GastroGastrodia elata tuber 10.66
JuvenJuvenile tuber3.02
Mother_GastroMother tuber of Gastrodia elata 107.95
Mother_JuvenMother tuber of Juvenile 18.69