Detail information of GWHGAAEX010896/evm.TU.scaffold_33.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479130684|ref|YP_005070644.1|9.00E-38TPR domain protein [Arthrospira platensis NIES-39]
nrgi|743882553|ref|XP_010909183.1|7.09E-122PREDICTED: protein IRX15-LIKE-like [Elaeis guineensis]
Swissprottr|Q9FH92|IX15L_ARATH5.00E-97Protein IRX15-LIKE
trEMBLtr|M0TM88|M0TM88_MUSAM5.00E-119Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P03360_001}
TAIRAT5G672102.00E-96Protein of unknown function (DUF579)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004421675912168846+
Transcript Sequence

Network for GWHGAAEX010896

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04669.12Polysacc_synt_41042881.50E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045492Biological Processxylan biosynthetic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.440
SRR2545915Juvenile tuber6.350
SRP108465SRR5643513five period of Gastrodia elata30.480
SRR5643514five period of Gastrodia elata22.850
SRR5643515five period of Gastrodia elata13.200
SRR5643524five period of Gastrodia elata20.690
SRR5643525five period of Gastrodia elata36.150
SRR5643528five period of Gastrodia elata25.040
SRR5643658five period of Gastrodia elata40.400
SRR5643659five period of Gastrodia elata57.720
SRR5643660five period of Gastrodia elata55.320
SRR5643661five period of Gastrodia elata52.550
SRR5643662five period of Gastrodia elata43.400
SRR5643663five period of Gastrodia elata68.830
SRR5643664five period of Gastrodia elata48.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.390
SRR6049655Rhizomagastrodiae_C368-T10_good_127.250
SRR6049656Rhizomagastrodiae_C368-T07_good_127.640
SRR6049657Rhizomagastrodiae_C368-T07_good_117.380
SRR6049658Rhizomagastrodiae_C368-T04_good_124.900
SRR6049659Rhizomagastrodiae_C368-T04_good_117.120
SRR6049660Rhizomagastrodiae_C368-T01_good_119.300
SRR6049661Rhizomagastrodiae_C368-T04_good_119.180
SRR6049662Rhizomagastrodiae_C368-T01_good_123.230
SRR6049663Rhizomagastrodiae_C368-T01_good_120.990
SRR6049664Rhizomagastrodiae_C368-T10_good_150.110
SRR6049665Rhizomagastrodiae_C368-T10_good_150.110
SRP279888GastroGastrodia elata tuber 41.88
JuvenJuvenile tuber11.46
Mother_GastroMother tuber of Gastrodia elata 15.95
Mother_JuvenMother tuber of Juvenile 11.04