Gene detail

Detail information of GWHGAAEX010952/evm.TU.scaffold_33.149

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000044	4032905	4034348	+

Transcript Sequence
>GWHTAAEX010952 ATATTCAGAGAAATTGCAGGTTTATGTTTCGAATCTTGATATGAGCAAAATAGAGAAAATTTTTATATTGAAAAATTGAAAGATAAAGATAGCTAAGTAGTAAGAGGAGTTATCCATGAACTTTATCTTAGGGTATATGCCATTTAAAAATAAGTTAAACTTATGCTGTATAAAAATTTATTAAGAACGTAAAGTTACAGTTTTTTTCATCTTTTTAATTTGAACCCCAAAGTCTAAGGTTTTATCTCCTCTTGTAGCAACACAAAGCATCTCTTCGATCGCATGGCTTGGGGCTAGACAAAACATAGCACGGACTTTGTACGTGACCAATACAGTCACAAATGCAACGCGATATGTATCAACATAAGAGCGGCTAGTTCGGGATAGGACAGACGAAGTTGGGGCGAAACGCTTTGCAGTGCTTGGGTGGCGCCTCCCACATCATTCGGGTTTCGTCTTGTAATGATTAGAAGATCGTGCAACATTCTGTATATCGATAATGATCTTCTACGGCTGTTTGAACAGAGGAAACTCAAGCGGGTGTTGTTTCTTAACAACACTTTGAAAAGCGCTCTACTTGTTTTTGTTAATCTTATTCTAAAGAAGCTTGCAATTCCGAGTGTAGCTGCCCTTTTTTCAGATGGCTTGCAGCTTCTTTTCTTCCTCAAGACAGTGGTTCTTTTCTCCAAACTTGATAGGCCGTCTTTTTCTGTCTTTGTGAAAACTCCCAGGCACGTGCAACCTTTTTTTTCTCCAAACAGTTTTTTTTCTTGGATAATAACCATAGAGCCTCACCTGTAACTGCTCCCCTTCTTTTAAGTGGCATACAGTTCCTCTAGAGTAAAACTAAGAGGGTGATAGTGACCGTGGCTTCTTGGTTCTCCTTCACGTGTGTGGCTTTCACGTGAAAGACTTCTCCAAGCACCAATAAAACTAATTTAAAATCAAAGTTTTCCAATCCAAAAGCAAGTCCATATGCATGCTAACGTGATGGAGTCCAATTCTTCTTAAAGTGAGCTTGATCAGCTGGCTTGGTAAGCTAATTTCTATTTTTTTTAGAATGAGCTGAAACATATTCCAAATAAAATATGCAGTCAAAATTTGCAAAAGTAATCTTACATATTGTAGCCATCAAAACTTTATGAGATACTTACTCCTTGATTAGCGCAATCAACTATATTTGAATATGTATATAAAGACTTTTGATAGCTATCAACCACTAATGCAGCTTTAAATAAAATACTATTAATTTATAATTTAAATAAATAAATACAGCAACAATTTCTTAATGATTCATGACATAGTCGGATTCGACAAAGTTTTATTGTAGTTGTCGACTACCTAATACAACCTTATTTCTGATCAGGACTCTGGACCTGGCAATGGTGGAGTTTTGATGATTATATATTTTAATCATCAAAACTTTATGAGATATGTACTCCTT

Network for GWHGAAEX010952

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.220
SRP064423	SRR2545915	Juvenile tuber	0.250
SRP108465	SRR5643513	five period of Gastrodia elata	0.800
	SRR5643514	five period of Gastrodia elata	1.580
	SRR5643515	five period of Gastrodia elata	1.390
	SRR5643524	five period of Gastrodia elata	1.760
	SRR5643525	five period of Gastrodia elata	0.220
	SRR5643528	five period of Gastrodia elata	0.290
	SRR5643658	five period of Gastrodia elata	0.520
	SRR5643659	five period of Gastrodia elata	0.660
	SRR5643660	five period of Gastrodia elata	0.710
	SRR5643661	five period of Gastrodia elata	0.470
	SRR5643662	five period of Gastrodia elata	0.460
	SRR5643663	five period of Gastrodia elata	0.740
	SRR5643664	five period of Gastrodia elata	1.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.580
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.990
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.900
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.900
SRP279888	Gastro	Gastrodia elata tuber	1.57
	Juven	Juvenile tuber	2.08
	Mother_Gastro	Mother tuber of Gastrodia elata	1.06
	Mother_Juven	Mother tuber of Juvenile	1.72