Detail information of GWHGAAEX010953/evm.TU.scaffold_33.150


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|384216662|ref|YP_005607828.1|9.00E-86malic enzyme [Bradyrhizobium japonicum USDA 6]
KOGKOG12570NADP+-dependent malic enzyme
nrgi|743804313|ref|XP_011017312.1|0PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Populus euphratica]
Swissprottr|P37221|MAOM_SOLTU0NAD-dependent malic enzyme 62 kDa isoform, mitochondrial (Precursor)
trEMBLtr|B9GP43|B9GP43_POPTR0Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIRAT2G135600NAD-dependent malic enzyme 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004440351404092137+
Transcript Sequence

Network for GWHGAAEX010953

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.18malic20922.50E-26
PF03949.14Malic_M1043701.40E-88
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00028E1.1.1.39 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004471Molecular Functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0051287Molecular FunctionNAD binding
GO:0004470Molecular Functionmalic enzyme activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.700
SRR2545915Juvenile tuber66.750
SRP108465SRR5643513five period of Gastrodia elata68.060
SRR5643514five period of Gastrodia elata69.960
SRR5643515five period of Gastrodia elata57.840
SRR5643524five period of Gastrodia elata61.640
SRR5643525five period of Gastrodia elata69.750
SRR5643528five period of Gastrodia elata67.450
SRR5643658five period of Gastrodia elata72.680
SRR5643659five period of Gastrodia elata62.080
SRR5643660five period of Gastrodia elata63.350
SRR5643661five period of Gastrodia elata56.530
SRR5643662five period of Gastrodia elata63.670
SRR5643663five period of Gastrodia elata68.310
SRR5643664five period of Gastrodia elata70.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_192.000
SRR6049655Rhizomagastrodiae_C368-T10_good_190.020
SRR6049656Rhizomagastrodiae_C368-T07_good_178.650
SRR6049657Rhizomagastrodiae_C368-T07_good_1107.360
SRR6049658Rhizomagastrodiae_C368-T04_good_193.100
SRR6049659Rhizomagastrodiae_C368-T04_good_1106.560
SRR6049660Rhizomagastrodiae_C368-T01_good_190.260
SRR6049661Rhizomagastrodiae_C368-T04_good_187.010
SRR6049662Rhizomagastrodiae_C368-T01_good_162.100
SRR6049663Rhizomagastrodiae_C368-T01_good_166.840
SRR6049664Rhizomagastrodiae_C368-T10_good_172.430
SRR6049665Rhizomagastrodiae_C368-T10_good_172.430
SRP279888GastroGastrodia elata tuber 59.26
JuvenJuvenile tuber90.20
Mother_GastroMother tuber of Gastrodia elata 53.07
Mother_JuvenMother tuber of Juvenile 77.69