Gene detail

Detail information of GWHGAAEX010957/evm.TU.scaffold_33.156

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	0	Aspartyl protease
nr	gi\|743847400\|ref\|XP_010939091.1\|	0	PREDICTED: aspartic proteinase-like protein 2 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q766C2\|NEP2_NEPGR	2.00E-35	Aspartic proteinase nepenthesin-2 (Precursor)
trEMBL	tr\|M0SLT8\|M0SLT8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P07210_001}
TAIR	AT3G50050	0	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000044	4306520	4330202	-

Transcript Sequence
>GWHTAAEX010957 CCGCTTAGACGATATACTCGTTGACTGTAACGCCCACTAAACTTTCGGCTACAAATCACATACCCTTACGCCATTGTCGGAGAGCGAGAAACAGGCCGACGTATAAATCTAGAATTTGTGTGCCAGAATTTAGGTGCAACGTTCCGCCAGCCGCCGGCGTCGTCAAGAATTTGTGAGGAGATTTTCTTCTTCAAAAAAAGAGAGGGAGATCGATCGACGTGCAGAGAAAACTAAGAAAAAAAGAAAAAATATGTCTTTCTTCATCTCCCTCCTTGTGGCCTCTCTCCATCTCCTCCCTCCCTTCGCAGAAGCGGATATCAGCGCAGCTCATTATCCGAGCACCGCCGCATGGAGCCCAATTGGTGGATCTCCTGCGCCTATGGTGCTTCCACTCTTCTACTCTCTGCCTAACTCCACGCTTATATCGTCGCCGCCATTGCGGGCGAGTAATTTTCGTCGCCGGAAGCTGCAGAAGAACTCTTCGTCTGCGGCCAACGCGCACATGAGGCTCTACGACGATCTTCTCACTAACGGGTATTATACAGCTAGGCTAAAGATCGGCACTCCTCATCAGCAATTTGCTTTAATCGTAGATACCGGGAGCACTGTCACCTATGTTCCTTGCTCCTCCTGTGAGCAATGCGGCAATCATCAGGATCCAAGGTTTCAACCTGATATGTCAAGCACATACGAACCAGTAAAATGCAGAACAGATTGTACATGTGATTCGGATGACAAACAATGTACTTATGAGAGGCAATATGCGGAGATGAGCTCAAGCAGTGGAGTTCTAGGAGAGGATATAGTATCTTTTGGCGCTGAGAGTGCTCTTGAACCTCAACGTGCTGTATTTGGTTGTGAAACTTCTGAATCTGGTGATATTTTCAACCAACATGCTGATGGTATAATAGGCTTAGGTCGTGGCCAGCTTAGTATCATGGACCAACTTGTTAATAAGGGTGTGATAAGCGATTCATTTTCTTTGTGCTATGGTGGCATGGACATTGGTGGAGGTGCTATGGTACTTGGTGGGATTCCGCTTCCACCTGATATGGTTTTTTCTCATTCAGATCCAGTTCGTAGTCCATATTACAATATTGAGCTGAAGGAGATTCTCGTTATGGGGAAGAAATTGGATTTAAGCTCAAGTGTCTTTAATGGCAAGCATGGAACTGTTTTGGATAGTGGAACAACATTTGCCTACCTCCCCAAAAAGGCTTTTATTGCATTTAGAGATGCTATTCTGAACAAGATAAATCTCAAACAAATTCCAGGTCCAGATCCAAATTACAGTGACATTTGTTTTCCTAATGCCGGAAGCGATGTTTCCCAACTCTCAAAGTTCTTTCCTGAAGTTGAGATGGTTTTTGGTAATGGGAAAAATTTGCAACTCTCTCCTGAGAATTACTTGTTCCGGCACTCTAAGGTTCATGGTGCGTATTGCTTGGGAGTTTTTCAAAACGGGAATGATGCTACAACACTTCTGGGGGGAATTGTTACCCGCAATACTCTTGTAACTTATGACCGTCGGAATGAAAGAATTGGCTTTTGGAAAACAAATTGTTCTGAATTATGGAAGGGACTTCAGTTCAGTGGCGCCCCGTCACCAGTACCTTCTGCTTCAGACGACACTCATATATCTGAAATCCCCTCACCTTCATTGCCTCCCAGTGAATCCCAGAACCCTATCTTTCCAGGCCAATACCGAGTTGGCGTTATAAGTTTCAATATCTCTTTGAGCATCGAGTATTCGGCTTTCAAGCCTCACATCAATGAATTCATAAAGCTGATTGCGCATGAGCTGGAAGTTGATAGTTCTCAGGTTCATTTGACGAATCTTACCAGGGCAGGAAACAGCACCCTGATACAATGCGCCATTTTCCCTTCAAAACAGGGCTTCATTTCTGGCAAAGCAGCACTGGGCATAATCACACGCTTAACCGAACACCGCTTTCAACTCCCTGAAAATTTTGGAAATTATCAATTGGTTGAATGGAAATTTGAACCTTCAAGAAGGTCATGGTGGCAAATGCATCCTGTTGGATATGCTGTTGGTGCACTAGCCATTGTAATAGTGCTGTCATTTTCGGTTGGGGCAGTGTGGTACTACTTGTGGAGACGGAGAAGAGGAGGAGGGTACAGGCACGTGGATGCGACTAATTTCCCAGAGCAAGAGCTACAGCCTCTCTAAATTTGAACATCAAAAACCCAATGCGTCCACTGGTTGAATAATGAAGACAAATAGTTTCCAAATATATAACAAATTCTGGATTTGTATAGACGATGATGGTGCCTGAAAAGACTAAGTACGACAATTTCACAGTGCGTTTGGAATTTTTGTCAAAATATTATATTTATATGTTGTGTATAGGAGGATCAAAGTTTATTATTATAAGCTGAGCGTGCTTTTTGGGACACTTCCTGCATTTTCTGGACATCGTCTGCTTATTAATTTAATACTTTCCCAGCTAAGAATGTTGAGCTTTGTGGTCCGGAGAATTTGAATTCTTGATCTTTATCTCTCTGTTATTGTTATGAGCTCAATAAAATGTTTTTTT

Network for GWHGAAEX010957

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	97	261	6.10E-39
PF14541.5	TAXi_C	281	433	2.50E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.440
SRP064423	SRR2545915	Juvenile tuber	25.190
SRP108465	SRR5643513	five period of Gastrodia elata	21.700
	SRR5643514	five period of Gastrodia elata	17.480
	SRR5643515	five period of Gastrodia elata	21.530
	SRR5643524	five period of Gastrodia elata	17.820
	SRR5643525	five period of Gastrodia elata	16.720
	SRR5643528	five period of Gastrodia elata	24.230
	SRR5643658	five period of Gastrodia elata	18.580
	SRR5643659	five period of Gastrodia elata	24.370
	SRR5643660	five period of Gastrodia elata	26.190
	SRR5643661	five period of Gastrodia elata	26.050
	SRR5643662	five period of Gastrodia elata	17.430
	SRR5643663	five period of Gastrodia elata	21.020
	SRR5643664	five period of Gastrodia elata	20.550
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	21.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.150
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	34.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.810
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.750
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.770
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.900
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.900
SRP279888	Gastro	Gastrodia elata tuber	21.41
	Juven	Juvenile tuber	24.29
	Mother_Gastro	Mother tuber of Gastrodia elata	39.20
	Mother_Juven	Mother tuber of Juvenile	43.25