Gene detail

Detail information of GWHGAAEX010959/evm.TU.scaffold_33.160

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743777335\|ref\|XP_010919097.1\|	1.55E-170	PREDICTED: uncharacterized protein LOC105043300 [Elaeis guineensis]
trEMBL	tr\|M0S6R8\|M0S6R8_MUSAM	2.00E-78	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P10270_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000044	4422977	4430492	-

Transcript Sequence
>GWHTAAEX010959 TCGGTAGGCCCCAGCATCCGAAGCCCGATGCTCTCTAAATGCGACTAGGGCCGGGAAGCCTTCCTTCACAAGGACGGGGAAGACAAAATAAAGGAGGATTGGTGGAAACGGAAGGATTTGCTTGCGAGAAAAGGAAATGTGCTTGAGGAAACAGCCCTAGGACGGAACCTCTGTCTCTTAATAATCTCTCGCAGGGATCATCGGAGGTGAACCTATGAGAAGAAGGTTAGGGTAGGTGAAGGATACAGTTTCATCGGATAGGGGAACAAAAGTTTACAGGGAACGGAACATCGTGTATAAAGCAGTCAAGGAAAGAGAAGACAGCAGAGGGTTCTCTTTTCTCTTAGCTTGCTAACCCTCGGTTGGATCCAGGGTTCTGCCATTCCGATCACAAGGGATCCGCTGATTTTACTGCGGGGATTGCTTTCTTTTTTGGGAACTGGAATTGGTTTTATAAAGGAAATACGAAGATGGAAGGAAACACAGGTGTTAGGACTTATTTGTTCTCCTGAAAGGGTGGGCTTTGGTCATGCTCTTTAGATCTGTACCTTGTGATAGCTTCTGTAAGTCTGGCTTATAAAGTAATGGTTCTGGTCATCTGTTTTATCCTGGAAAAAACTGTATTTTGGTGAAATTTTGCTCATATCATGGATCTATGGCTTGTTGTATGATATGACCTGGAATGATGAATGAGGAACCTGGATTGGCTCTCCTTTTTTTTTCTCAGCAGCAGATTGGGTTATTTCGCCATTTACTTCTTTTTATGCTGTTGAGCAAGATGGATTTCTTTCTTATCATTGGTCTTCATGCTGTCTTTTCAGACAGTATTTTTGAGTTTTGATGGTTGATGGCTTACCATGAGAAAGTTGTCTGGATTTTTTTTCTGCTGCTTCTGCAAGTGCTCTTCTGTTGATGCCATGAAATACTTCTAACTCTTGGTGCAATCTTCTTGTCTCCAATTTGACTATATGCTTACTGATTTGGGGCACGTACTTTCCTGAGATAGCTCTATATACCATATATTTCAGTAAGAGTTTTGGGGCTTTAAGGCTAAACTGCCTGATGGAATATTGGCGGATGCTGCAATTTGGAATCCTGCTTCTCTGTTTAGTACAACAATATTATTTTTGTCCATTGTATTTAGTTCATTAATGATTACATGAGGGGAAATTGGCTTCAGAAAAATTGGTCCTTCTTTGGTGATGAGCTGCTCTCCTAATTCTGTAGGGCTTTTCTTTTGTGGTTGAGGACACTTATTTGATTAAATCCTTTATTATTGTGTCAGAAACATGATCAGATATTTTAATCAATGATTCAGTTTTGTACATGTAACAAGAGGTTTTCCTCCCCTATTGAGATTCCCAAGGACCAAGAAAGCTCAAAATCTTGTGGGAGATGTGGTGGAATATTATCAGTTGATGAACTTGGTGGCTTATCAAGAAAGATGTGGAGCATTATGGGACCAGAGTTTTCTCTAGCAATCGATCCACAATTGAAGTGGAAAACATCATCAAATGGTAAGCACCGAGCTTTGAGGAGAGCGAGAATCTTTACACAGGATAATGGAAAGAAGTTTACTGCTAAAGATACAAAAGATATCGAGGATCTCTTTGATAAAGTTTCAAAGACAGAAGGGGACATACTGGTGTCCGAGTCTGAGAAGTTTGGTGTTAGCGTTCTTGGTCGGCGATTCAGTGATAAGTTTGACAAAGTTCCGATAAAGAAGAGGAGGTTATATTTACCACCTCAAGCAAACCCACATACTTTATCATCTTCTGGATATAATGATCACGATCATGGAGACCTTTTTACTGTATTCCAAAATAATCAAGTTTCCTTTATTGAAGATGCATCTTGCATAGATTCTCCTGGTGTAGTCGGCCAACATCATGAGAAATGTTCTGATGATGAAAAAAGGGGCTCTGGGGGCATTAACGAACACATTCATCATACTGGTGATTGTGATGATTTTTCTGGTATTTCTATATTGGCCGCTGCTGCTTGTCATAGTAGCATAGATAAAGGATTTATGGATGCTGAGGGTATAACAGTGACACGGCATTCTTCCGAGGAAAATCCTGCGCCATTAAAGTTAAGTAAGAACCAATCATCTCAACCTGAACATGAAAACATCAAACAAAAACATTTAGAGGTATCATTTATCACAGGCAGCACACCTCACAGTGACCCAGTTCAAACTAAGTTTGATGAATGCAACAATTTAGTGAGTTCTGTTGGTTCCCTGCACAGTTTTATAAGCAAAAGGAAATTGTTGCCTTCTAGTGGTGATAGGTTGAATTGGGATCTCAATACAGTAATGGATGTATGGGAAAGTCAGCCGGAAGAATTTCTTAATTCTGATGTTAAGGGCAATGGAAGTCATGGCATGGAACATGTAAAACATGGACTTATTCAAGATGAAGCTGGAGCTGGCTTTGGAATTAGCAAAGTTGGGTTAGCAGCTGTTAGTAATGAGAATATTTCACAAAGTCTTATTAAGGAAATAGATATTCAACGATCTAGTCCTGTGGTAGATTGTGATGGAGGCAAGCCTGGCTCACTGCAAGCTCAAGTTAACGAATCTTTACTGAAAGAGATCCAGTTTACGGATACTGAAGCCATGGTGGCAAATGCTGGTGAGAAAACATCCGAGGGTAATTGCGAGAGAAATTGTGCTGTCTCTGCAAATGCGCATTCCGTTGATGATATTTCAGATTTACACAGGGACGTCTCTACAAATATGGTGGTTGCGACTGAGCAACATAAGCATGAAGCTGCTAATGTAAGCTATAGTGTTATTCCCGGTTGTGTAGTTCTTGAACGAACTATGAATGACAGTGATACATTTTCCAAAGGCAAAAATATCGAAGAAATGTTGCATGATGATAGGGCATCCATTATTATTTTGGATAGTTATGATGATCATTCTGAAGAATGCAACCCAGCTTATGTTGGGAAAAATAATCAGCCAAGTAGCCCACATGCTGAAAAGCATCAGCCTTTTTCTACTACTGAACAACTCAATGTTAACAACCCTCAACAGTCAGTAGTTGGACTACTTGATCAAAATACACCAGGAACTGCTGTTATTGTAGATGAAAATGCTTCTCAGGTAGCCCATGATGGAAACAGTTCCAAACACATTACAACTGAAGGCCGTCTGGATGAGGAAACTGCGTATAATCATAAAATTTTAAAATCCCATGCTAATGTGAATCAATCCATTGTTCTTTGGAAAGAGACATCTGATAATGAGAAGGTAAATTTCAGAAATGCATGTGCTAATCAACATGAAGAAACTTCTACTGTTTGGAAGGAATACAATGAGAGTAAATCTTGCAATTTGAGTTGTGAAAGTTTGAATGCTAGCTCAGCTATTACATTTTATATTTCCCCAAAGCTTAAAAAGTCAATTTCAGAAGGAAATCTGTTGGATAGAAATGACATTTCCTTTGCTGATAATGTCTTGATTTCTCCAGGGGACTGCAAAACACATGGCCATGTGAGGCGTTCAGGGAAGGATTCTTTGGAGGAGCGTTACCATTCTCAACATCACTCATATGCTTATTCAACTGTTAATAATGTTACTACTGGATTGGAGAAGGCTGAGATTCTTGGGGATGATGATTCTCAGTATGAAGATGGGGAATTGAGAGAATCTGTTCTGAATAGTTGGGAAGAAGACGAACCTCAGGATGTGGAAACTGAACACGTAGACTATGGATCTGACTGCAGAGATGCAGATTGTTTTGAAGCTGAATCTGATTTGGTTGTTGGAACTACAGATTGTACGCCTGAAGAAAGGATGGTTTCTACAAGTGATGGAAATGGATTTCAGGTTGCAGAGGTTGATTCACAGTCCGAGTGTTTACAAAAGAGTTTTTTGGTTGAAGATGTTTTAAATGCCAACTTTGGTGAGGGGGATTTTGGGAAAAATATTATTGAAAATGCTGTTAGTAAACTCCCTGCAAAGGATGAAAATAAATTGCGTGCATCTAGTATACCTACTGACTTTAATGATGTTCCTGGGAAATTATGTCAACCAGAAAGTTCTAGAATAAAATCTTCAGGATGGGACAAATTGCCTAGAAGTGAAAATTCTGCAATCAGATCTGTTGGTGGTGATTATGCAAGAAGAATGACGGTTTTATCAACAAAAAGGGATTTGCCTAATAGAGTAGAAAGATCAAAGTCTTCTGAAGCATCATGCAGAAAGGAAGTACCTTATGTTATGGAAAACAGGAAACATGGTCAGATTGATTTTAATGCTGAAAGGAATGCTAATCTTGGGAGACCTATTGGAAGGACCAGGCTACCTTTCCATACACATGGTAGTGGTAGAGGCAGAGGTAGAGGTGACGGTTGGGCAGGCTCTCCAGAGCATCATGGTAGTTGTCGTTTTGATACATCTGGATGCTATTCATCTTCCAATTTTGCACCCTCTGGCCCCACAAACGCTGCTGCTGCTGCTGTTGCGAAAGCCGAGAGCAATGGGTGTGTTGTTGCGCCTGATGGCACAATTGTGAAAGCTGGTAGTATGGGGTCTGGATCTCATTTATCCAGGCGTTCCTCAAAGACTTCTCTTTTACAGTCTGCAAGAAGGGGATCAACCATGGAGAGTGATGGAGCATTGGGCCTCCCCTCTGAGCCAACAAGCAATTCCATCAGAGGCGTTAGCCCCTGCAGATTCTTTAATATTGGAAGGGGAAGGGGCAGTAGATACGGGTCTGGTGGAATGGTCACCCTTGGACAAAGGAATAAGTATCATCATGATTCCATGCTTGAGAGTGGAATCGAAAATCTATCATTGCAACATTTTTCGTCCAGGAGGCAGCACAGCTTTTCTCCACATAGAAAACCCATGCTTGTTTCTCATGAGCATACAAGGTCACCATCAAGATCGAGAACCCAGTCCCCTCATACTTGGACATCTCCCAGGGGAAGAGATGGTGGCAGGATGAGCGGTCTTCCCGATGTAAGGAGGCCAAGCAGTCGGTCTCCAAACTTTAGAACTCAAAGACGGATACTGAGGCATAGATCACCTCAGCGCCATGTCATTCCTGCTGAAGACTTTGGTGCCTATGGCCCTCAATCCAGAAGCTGCTCTTCTCCGCCACATACTTCAAGATGGTTTGAGAATGAGAGACTCCTACAGGGCCAACTTCATGAGCATCATCAGCCTAGGCGTCCTCCCGCAGGCGGAAGCTCTCCTTCTAAAATTTTCTCACACAGCAATCGGCTTGATCACAGCGATCCTCGTGGAAAGGTTATTAAGCCAGACGAATACTACCAACCAAATTATTCAGGAAGGTTTTCAGAGTACGCTGGCTATAATAATAGTAGACGGGGAACAAGAAGTAGAGACGGTGGAAGAAGGGGAGAAGTTGGCAGATATGACATACTCCATCCTGAAGGGCATTTAGAAAGCAGCGGCAATATGAAATGCCTTCGATATGAGAGCAATGGCATCAGGGCACACAACTTTCACCGAACTAAGGCCTCGGGCTTTCCACAGAGGGAAGGCCCGAGGACATTTTATAGGAGCATTGATGCTCAACGTGAAAATTCGCCTCCACGAATCAAAGGCGAGATGGTTCGTTTCAGACATGGTAGAGATGTAAAATTGAACGCTGATTTCAAATCATTTGCAGTTCAGAATGCCCGTGATGATATGCCCTTGCAGAGAAGGCCTTCCTGATTGGTTTCCATCTTGTTTTTTTCTTTCCCTTTTTTTCATCAGTTGCCAGGAGATGCTGGATCCTGCTATTATTTTTGTGATAGGAAGAAAAGCATCATAATCTTGTGGTTATTCTATTTCGAGGCATTTGTAAAAAATTTACATCAAGTTAGGACTTAACTTTTTCTTTTTTTTTTTCTTCTGTATTTTCTTTTATTGTTATACCTTCACTTTTGCCTACTCTGTTTAATTTTTTCTCTAGGCAGCAGTTGTTGGAGTCTGTGTATGAGGCCCATGAAGAACTGATTAATTAATCAATCTGATGATTTGGTCATTTTGTTTTGTTGTTATGACCTTACGATTAGCACCGAGCATCTGCCTTTTGAAAAGCATGGCATGATGTTGATTCTGGAAGTAATGAGCTGCAATGGCGTCCATAAGTATCCTTTCCAGCACATTTTTCAAACATCGATTGCTGTTTATAACTGCAATTTTCTTTGTTTTCTTGCTTCTTTGACAAAAAGATATGTATGTATTCGAGGCATCTCTCTTTGATTAATTTTTGTAAGAATTTTTTTATTTAAT

Network for GWHGAAEX010959

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX010959
MIQFCTCNKRFSSPIEIPKDQESSKSCGRCGGILSVDELGGLSRKMWSIMGPEFSLAIDPQLKWKTSSNGKHRALRRARIFTQDNGKKFTAKDTKDIEDLFDKVSKTEGDILVSESEKFGVSVLGRRFSDKFDKVPIKKRRLYLPPQANPHTLSSSGYNDHDHGDLFTVFQNNQVSFIEDASCIDSPGVVGQHHEKCSDDEKRGSGGINEHIHHTGDCDDFSGISILAAAACHSSIDKGFMDAEGITVTRHSSEENPAPLKLSKNQSSQPEHENIKQKHLEVSFITGSTPHSDPVQTKFDECNNLVSSVGSLHSFISKRKLLPSSGDRLNWDLNTVMDVWESQPEEFLNSDVKGNGSHGMEHVKHGLIQDEAGAGFGISKVGLAAVSNENISQSLIKEIDIQRSSPVVDCDGGKPGSLQAQVNESLLKEIQFTDTEAMVANAGEKTSEGNCERNCAVSANAHSVDDISDLHRDVSTNMVVATEQHKHEAANVSYSVIPGCVVLERTMNDSDTFSKGKNIEEMLHDDRASIIILDSYDDHSEECNPAYVGKNNQPSSPHAEKHQPFSTTEQLNVNNPQQSVVGLLDQNTPGTAVIVDENASQVAHDGNSSKHITTEGRLDEETAYNHKILKSHANVNQSIVLWKETSDNEKVNFRNACANQHEETSTVWKEYNESKSCNLSCESLNASSAITFYISPKLKKSISEGNLLDRNDISFADNVLISPGDCKTHGHVRRSGKDSLEERYHSQHHSYAYSTVNNVTTGLEKAEILGDDDSQYEDGELRESVLNSWEEDEPQDVETEHVDYGSDCRDADCFEAESDLVVGTTDCTPEERMVSTSDGNGFQVAEVDSQSECLQKSFLVEDVLNANFGEGDFGKNIIENAVSKLPAKDENKLRASSIPTDFNDVPGKLCQPESSRIKSSGWDKLPRSENSAIRSVGGDYARRMTVLSTKRDLPNRVERSKSSEASCRKEVPYVMENRKHGQIDFNAERNANLGRPIGRTRLPFHTHGSGRGRGRGDGWAGSPEHHGSCRFDTSGCYSSSNFAPSGPTNAAAAAVAKAESNGCVVAPDGTIVKAGSMGSGSHLSRRSSKTSLLQSARRGSTMESDGALGLPSEPTSNSIRGVSPCRFFNIGRGRGSRYGSGGMVTLGQRNKYHHDSMLESGIENLSLQHFSSRRQHSFSPHRKPMLVSHEHTRSPSRSRTQSPHTWTSPRGRDGGRMSGLPDVRRPSSRSPNFRTQRRILRHRSPQRHVIPAEDFGAYGPQSRSCSSPPHTSRWFENERLLQGQLHEHHQPRRPPAGGSSPSKIFSHSNRLDHSDPRGKVIKPDEYYQPNYSGRFSEYAGYNNSRRGTRSRDGGRRGEVGRYDILHPEGHLESSGNMKCLRYESNGIRAHNFHRTKASGFPQREGPRTFYRSIDAQRENSPPRIKGEMVRFRHGRDVKLNADFKSFAVQNARDDMPLQRRPS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.520
SRP064423	SRR2545915	Juvenile tuber	20.400
SRP108465	SRR5643513	five period of Gastrodia elata	18.300
	SRR5643514	five period of Gastrodia elata	21.670
	SRR5643515	five period of Gastrodia elata	18.730
	SRR5643524	five period of Gastrodia elata	19.510
	SRR5643525	five period of Gastrodia elata	32.760
	SRR5643528	five period of Gastrodia elata	28.890
	SRR5643658	five period of Gastrodia elata	25.810
	SRR5643659	five period of Gastrodia elata	19.420
	SRR5643660	five period of Gastrodia elata	20.450
	SRR5643661	five period of Gastrodia elata	17.090
	SRR5643662	five period of Gastrodia elata	21.160
	SRR5643663	five period of Gastrodia elata	20.100
	SRR5643664	five period of Gastrodia elata	20.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.830
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.870
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.690
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.050
SRP279888	Gastro	Gastrodia elata tuber	21.46
	Juven	Juvenile tuber	24.55
	Mother_Gastro	Mother tuber of Gastrodia elata	34.34
	Mother_Juven	Mother tuber of Juvenile	40.02