Detail information of GWHGAAEX010981/evm.TU.scaffold_335.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743805620|ref|XP_010927490.1|9.77E-96PREDICTED: LOW QUALITY PROTEIN: UPF0496 protein At3g19330-like [Elaeis guineensis]
Swissprottr|Q9LT84|U496M_ARATH4.00E-64UPF0496 protein At3g19330
trEMBLtr|D7UDJ3|D7UDJ3_VITVI6.00E-82Putative uncharacterized protein {ECO:0000313|EMBL:CBI40808.3}
TAIRAT3G19330_26.00E-63Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000329120088141094+
Transcript Sequence

Network for GWHGAAEX010981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05055.11DUF6771863597.20E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.410
SRR2545915Juvenile tuber7.280
SRP108465SRR5643513five period of Gastrodia elata10.870
SRR5643514five period of Gastrodia elata8.200
SRR5643515five period of Gastrodia elata11.170
SRR5643524five period of Gastrodia elata8.750
SRR5643525five period of Gastrodia elata14.490
SRR5643528five period of Gastrodia elata14.810
SRR5643658five period of Gastrodia elata12.150
SRR5643659five period of Gastrodia elata12.480
SRR5643660five period of Gastrodia elata12.600
SRR5643661five period of Gastrodia elata15.940
SRR5643662five period of Gastrodia elata14.000
SRR5643663five period of Gastrodia elata12.020
SRR5643664five period of Gastrodia elata14.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.580
SRR6049655Rhizomagastrodiae_C368-T10_good_113.530
SRR6049656Rhizomagastrodiae_C368-T07_good_110.210
SRR6049657Rhizomagastrodiae_C368-T07_good_19.470
SRR6049658Rhizomagastrodiae_C368-T04_good_18.930
SRR6049659Rhizomagastrodiae_C368-T04_good_110.690
SRR6049660Rhizomagastrodiae_C368-T01_good_19.700
SRR6049661Rhizomagastrodiae_C368-T04_good_19.380
SRR6049662Rhizomagastrodiae_C368-T01_good_18.620
SRR6049663Rhizomagastrodiae_C368-T01_good_110.670
SRR6049664Rhizomagastrodiae_C368-T10_good_111.160
SRR6049665Rhizomagastrodiae_C368-T10_good_111.160
SRP279888GastroGastrodia elata tuber 6.86
JuvenJuvenile tuber10.40
Mother_GastroMother tuber of Gastrodia elata 17.04
Mother_JuvenMother tuber of Juvenile 16.58