Gene detail

Detail information of GWHGAAEX011000/evm.TU.scaffold_34.19

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743850396\|ref\|XP_010939875.1\|	0	PREDICTED: uncharacterized protein LOC105058600 isoform X2 [Elaeis guineensis]
trEMBL	tr\|M0TGN3\|M0TGN3_MUSAM	1.00E-130	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P11450_001}
TAIR	AT1G17360_1	2.00E-60	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000037	905100	952149	-

Transcript Sequence
>GWHTAAEX011000 TACTTATGAATCGACTCGAAGCTCCCTCCGCTGGACATCTTTTGTAGATCGACACTGCCATGACGAATTGAAGAGAGGTACAGCAAAGGGGTGAGCACTGCCGTTGTGAAGACAATGTATATCGATATTGGATGTCTCTTGAAGCTGCGACGAAGGCACGGAAGTCGCGAAAGCAGGTTGCTGGAGCGATCCACCTTTTGAAGGCCGGAAAGCTGAATCGTATCGTGCTTTGACAGATGTGGATTGTTAGAGAACCTACGATGATATTTCTCCTCACTGCATTGCATGATTTCCGGGTTTTGGGATTCTGGATTTTGGAGGGCCAACTTGGGTTTTGTACCTTCATGGATCCTAGATTTTAAGGCGGCTTTGGAGCGAGATTTTCAACTAGTTGTTAAAGAAGATGAATTCCGACGTTCCTCTCGATCGTGCATTTTTTCAGCTCTCCCCAAAACGGACAAGGTGTGAGCTATTTGTTTCATCTGATGGGAAGACTGAGAAACTGGCATCCGGTTTCTTGAAGCCTTTTTTGACCCATCTGAAGGTTGCTGAAGAACAGGCTTCTCATGATGCTCGCTTAATCAATCTAGAAGTTGGAAGAAAGAAAAATGCAGCGATGTGGTTCAGTAAAGGAACTGTTGAGAGGTTTGTACGGTTTGTTAGTACTCCAGAAATATTGGAGCTGGTCAATACATTTGATGCAGAAATGTCACAGCTGGAAGGAGCTAGGATGATGTATTATCAGGCTGCAAGAGACCAATTTTCTGATGAAAGTGAAGCCAAATCTCCTGCATCCGTGGACGTAACAAAGAAAGAGCTTCTCAGAGCCATTGATGTACGACTCACTGCTGTAAACCAGGATCTGGCCACTGCTTATGCCAGGGCATGTTCTGCTGGTTTCAGTCTAGAATCTGTGTCCGAGCTTCTTTTTTTTGCTGATCAATTTGGTGCAATTCGCTTAAGTGAAGCTTGCAAGAACTTTCTCTCTCTGCGTCAACGTAGGCCAGACTTGATTAGCCATCAAAAGTCACTGCCCTCAGCTATCCATCAACAGTGGAACAGCTTTAATGATTCCAATATTCGTTCCTCTGGTTCTGACATGTCTATAGATGAACCAGAAGTCGGGCAGCTGAATGATGCTAGATCAGCTATTTTTCACCGTGGTGATTTACTGCTGCATAGTGCCAGTTCCCAGCCAACAAAAGCTGTATGTCAACCAACTGCTGCCATCATGGAGCATCCAAAACCTGACTCACGACCTCTGGTTGAAAGGGAGATGGAAAAGACGGATGATCCAGCTTCTAGTGATGTTTCTTCAGCAAAGTTTGCTCAACAGACTGGAGGATCAAAACGGCTAACTGTACAGGATCGAATAAATCTTTTTGAGAGCAAGCAGAAAGAACAATTGGTTAGTTCTAATGCTGGAGTTAGCAGCTCTGGTGCCACAACTATTAGTAGGTTGCCTGTAACTAAAGGGGAGCACCGGAGGAACCCATCTGATGTTTCTGTAGAAAAGTTAGTTTTGCGGAGATGGAGTGGTTCTAGTGACATGAGTATTGATCTCAACTGTAGCAGCACCGGCAGCATTGACCGGAAAGAAAGTGGGAGCGCTTCAGGAACTCCAACTTCATCTGCCAACTCGCAGCCTCAAATCTGTAGTAGTAATTTGGAGAATGATGGCAGTGGCTTAATAAAGGCATCTAAACCTTACGCTCAGTTGAGTTCTAAAAACGGCTTGGAGAAAAAAATTTCAACTTTATCTTCTTCTCAGGATCAAGATAGAAATTTCCTAAAATGCGAAACTCAAACCAGGGATGTAGTTCATAAAGAAGGAATTGCTTCAACCTTGAAGGAACCACCTGAATTTAGTAAGGAAAAAGAGCAGCCAAAACATTGGATTCATATGGGTTGCTCTTTGGAGAGTTTAGAGCATGGTGGCATGCGTGACCAAGATGCACTGCAAAGCAGAACAAAAAGCTTTTCCAACTCTAGAGAGGCTGCTATATCGAAAGATCCTGAACCCTCTCAAGATGAATCCCGGTTTGCTTTGATGAATCTTGACAATGATCAAATGTTGCCTCAGATTTTTTCTAGAGCACCTCTATCTTCAAGAGTGCCAACTGTGTCAAAAAATCATGCTAATCTCTTTGTTCAATCTAGAGACCAGGTAGAAGTAGCTGACATTGATTTAAAGACTCAGTCTATCTCTGTTCCCCAATTCAGGGTTTTCACCAGCAAACATGTAAATTCTGGACCAAAATCTGTGAGTGCCATGGATTGCCAAGTTCATTTTGAACCATCTGTGGGAAAGATGGAAGATATATCTCTTAAGGGTGACAGTGGGCATCCTGAAAGCAATATTAGCCATTTTTATGAGCATGAAACAAAGCAGTCAACTCTTGTAGCTCCTCAGGGAAAAACTGATGAAGCAGTTCCTGCTGAAGGGAGCAGCAATGGACAGTGCAGGAAAATTAATGAAGGCTTGGAAGCTCCTCCTTTCTCAGTTGCAGAATCTCTTACTGGAAGGCCAAATACAGATAATCATGCACTTAATGAAGTACTTCAAGTCAAGGCTGAGGAACTGGAAAAGCTTTTTGCTGAACACAAGCTCAAGAAACGTCGTGATCAGGTAGCTTCTTCACTGAGAAGAAAAAATTTGCATGATCATGCAGCTAAGTCTGTGGAGAAAAAACCAACCGAGTCTTCTTCCAAGCAAATGTCTGGAAAGAGCCTACTGTGGCAAGATTCAAGCAATAACATTGAATTTGATTCTGAGTTGTCAGGAATGATAGAAAAAGTTGACTTGTGTGGTGAAATCAAGGTGCAAACATTCAGGGATCATTCTCCAACAGATGGTCCAAGAGGAAAACTTTATGCAAAATATATGCAGATAAGAGATGCTAAGCTGAGTCAGGAATGTAGATCCATGCGGGCTCAGAAGGAAGCACAGATGAAGGCAATGCATGACAGTCTGGAACATAGCCAAACAGAGATGAAAGCCAGGTTCACAGGATTTTCTGATGAACAAAAATTGGCAGATGCTCATCGCCGGGCTGAAAAGTTGAGGTCATTCAATGCTCATTCAAATTTTAAAGTTAGAGAGCAGACATCAGAGTTCTTGACAGGAGATGGGGATGGTGATGATCAAGAACTGTCTGAATCTTCAATTGGAAATCAGTCCAAGAAGGTTTTATCCTATAAACCCTTGTCCTCCACTTCTTTGACATCAGTAAGTCCTTCTTCAAAACATTTGATGAAGTCTCCACATTCCAACTCCTCGAAGCAAAAGGGACAAACAGAAAATCCTGTTGCGCAATCAGTTCCCACGTTCCTCAATTTGAAAAATGAAAACATCAAACCATCAGCAGTAGCTACCAAGGTGACTCCCCGCGGCCGACCGAGAAGTTTTGCACGAAGCAAGAGCTCTGTTGAAGATACAGAAATTTTGAAGGAAGATCGACCCCGTTCTAATGCTGCCAGGAAGAACGTTGCTATTTCTGCTGAGTTGAAGGACTTGTCCTCTCTCACTTCTGAGAAGACCCCTATCAATGTTCAAATAAGTGGCGAGTTCAAACGATATCTCAAGAAGGGAAATGGCGTAAACCATAGCTCTGGAGCTGTTACTGGAAAATCCAAGAGCTCCTCAATTCCTGAGGAACTTAAGAACAGAGAAAAGTTTGAAGAAATTGTGAGCCAGAATGACGATTCACTAGATGCTGACCTTAAAATTGAGGAGTTCAAAAGAGATCATGCTGAAAGAAATAACTTAATTATGGATCTTCCTGTCGATTCTGATAGTGAAAAATCCAGGCGCAACCATGAATCTGACCAACCTGAATCTGACAATGGTGACCTCAAGACGCCATCATCCCATCTAGTTGATTCTACGATCATTTTTTCTAAATTCAATGCTGCAAGAAATGCCGAGGATTCAGCCGAAGAAAGCTCTGGATCATTGAACTCTCATGTTTTCCATTCACTTGTTGATACAAGAGAAGCATCAGATCTTTATGCATCTGTAGATTTTCCTTCTGGTTCTCCATCATGGACTTCTCAGCCGTTGGGCCAGATAATGGATTCTGAAGCAGCTCGAATGAGGAAAAAATGGGGAAGTTCTCAGATTCCAGTCATGACTAACAGCGCCTCCCAGCAATCACGCAGAGATGTAAAGAAAGGCTTCAAGCGATTATTAAAATTTGGAAGAAAAATTAGGGGTGCAGACTATCTATTAAATGATTGGGTGTCTGCTTCAACTGCCTCTGAGGGTGATGATGACCTTGAAGATGTTCGGGATTCAGTACACAGGCCCTCAGATGATTTCCGGAAGTCTAGAATGGGCTACTGTATTAAGTCATATGATGGATTCAATGACAGTGACATCTTTCCAGAACAAGGATGCTACGTCCGCTCGTCTCATGGAGCACAAAAACCACTCAACAGTTGCTCGCATGGAGGAGAAGTACTTGGGTGCTTGTCACAAACACCACAGATTATAAGGCACAATCTCAGCGAAGTTCAATCCCAAATCCTTCTGCAAATTTCAGACTGAGGGATGATTCTCTATCGGAAAGCTCTCTAAAAGCACCTCGCTCTTTCTTCTCCCTGTCATCGTTTCGGAGCAAAGGGGGTGACTCCAAGCCCCGGTAACTGGTTCTGCTGCTGCTGCTGCTACAGCCACCGCCTATATTTTATTTTAACCGCATGAAGAGTTTACACACAGCTTCTCCTTTAATATGAGGATGCATTATCTTTTCCACCTGCACTCAGTTTTTCAGCTTGGGAAAATCATCAGCCTATTCAGAGTTCGTTCGTTTACAAGGTTAATTGTCCAGACTCTGAAATATATATTATTCATAATCTGTATTACAATTTGACTGCATTTGCGATGCCGTTTTGGTCTTCTATTTGATTTGTAAAAATAAAGATAAGAAAATCTTGGCCAATTGTTTCTTCTCTTTTGATTTATCTCCACTGCTGTGATACTTTATATTAAATAGTTTTAATGAAATATTTGCTGGTTCTTTTTAATAATTC

Network for GWHGAAEX011000

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011000
MNSDVPLDRAFFQLSPKRTRCELFVSSDGKTEKLASGFLKPFLTHLKVAEEQASHDARLINLEVGRKKNAAMWFSKGTVERFVRFVSTPEILELVNTFDAEMSQLEGARMMYYQAARDQFSDESEAKSPASVDVTKKELLRAIDVRLTAVNQDLATAYARACSAGFSLESVSELLFFADQFGAIRLSEACKNFLSLRQRRPDLISHQKSLPSAIHQQWNSFNDSNIRSSGSDMSIDEPEVGQLNDARSAIFHRGDLLLHSASSQPTKAVCQPTAAIMEHPKPDSRPLVEREMEKTDDPASSDVSSAKFAQQTGGSKRLTVQDRINLFESKQKEQLVSSNAGVSSSGATTISRLPVTKGEHRRNPSDVSVEKLVLRRWSGSSDMSIDLNCSSTGSIDRKESGSASGTPTSSANSQPQICSSNLENDGSGLIKASKPYAQLSSKNGLEKKISTLSSSQDQDRNFLKCETQTRDVVHKEGIASTLKEPPEFSKEKEQPKHWIHMGCSLESLEHGGMRDQDALQSRTKSFSNSREAAISKDPEPSQDESRFALMNLDNDQMLPQIFSRAPLSSRVPTVSKNHANLFVQSRDQVEVADIDLKTQSISVPQFRVFTSKHVNSGPKSVSAMDCQVHFEPSVGKMEDISLKGDSGHPESNISHFYEHETKQSTLVAPQGKTDEAVPAEGSSNGQCRKINEGLEAPPFSVAESLTGRPNTDNHALNEVLQVKAEELEKLFAEHKLKKRRDQVASSLRRKNLHDHAAKSVEKKPTESSSKQMSGKSLLWQDSSNNIEFDSELSGMIEKVDLCGEIKVQTFRDHSPTDGPRGKLYAKYMQIRDAKLSQECRSMRAQKEAQMKAMHDSLEHSQTEMKARFTGFSDEQKLADAHRRAEKLRSFNAHSNFKVREQTSEFLTGDGDGDDQELSESSIGNQSKKVLSYKPLSSTSLTSVSPSSKHLMKSPHSNSSKQKGQTENPVAQSVPTFLNLKNENIKPSAVATKVTPRGRPRSFARSKSSVEDTEILKEDRPRSNAARKNVAISAELKDLSSLTSEKTPINVQISGEFKRYLKKGNGVNHSSGAVTGKSKSSSIPEELKNREKFEEIVSQNDDSLDADLKIEEFKRDHAERNNLIMDLPVDSDSEKSRRNHESDQPESDNGDLKTPSSHLVDSTIIFSKFNAARNAEDSAEESSGSLNSHVFHSLVDTREASDLYASVDFPSGSPSWTSQPLGQIMDSEAARMRKKWGSSQIPVMTNSASQQSRRDVKKGFKRLLKFGRKIRGADYLLNDWVSASTASEGDDDLEDVRDSVHRPSDDFRKSRMGYCIKSYDGFNDSDIFPEQGCYVRSSHGAQKPLNSCSHGGEVLGCLSQTPQIIRHNLSEVQSQILLQISD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.610
SRP064423	SRR2545915	Juvenile tuber	16.110
SRP108465	SRR5643513	five period of Gastrodia elata	10.810
	SRR5643514	five period of Gastrodia elata	11.930
	SRR5643515	five period of Gastrodia elata	12.370
	SRR5643524	five period of Gastrodia elata	11.370
	SRR5643525	five period of Gastrodia elata	13.480
	SRR5643528	five period of Gastrodia elata	13.070
	SRR5643658	five period of Gastrodia elata	15.570
	SRR5643659	five period of Gastrodia elata	14.670
	SRR5643660	five period of Gastrodia elata	17.530
	SRR5643661	five period of Gastrodia elata	17.320
	SRR5643662	five period of Gastrodia elata	15.730
	SRR5643663	five period of Gastrodia elata	14.700
	SRR5643664	five period of Gastrodia elata	13.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.480
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.610
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.300
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.170
SRP279888	Gastro	Gastrodia elata tuber	11.52
	Juven	Juvenile tuber	12.65
	Mother_Gastro	Mother tuber of Gastrodia elata	7.06
	Mother_Juven	Mother tuber of Juvenile	8.07