Detail information of GWHGAAEX011012/evm.TU.scaffold_34.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695008521|ref|XP_009390857.1|3.23E-31PREDICTED: protein TIFY 10A-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LMA8|TI10A_ARATH7.00E-23Protein TIFY 10A
trEMBLtr|M0RQQ9|M0RQQ9_MUSAM9.00E-32Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P09290_001}
TAIRAT1G191802.00E-22jasmonate-zim-domain protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003718407821845903+
Transcript Sequence

Network for GWHGAAEX011012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify741076.90E-17
PF09425.9CCT_21261511.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
K13464JAZ Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.190
SRR2545915Juvenile tuber46.930
SRP108465SRR5643513five period of Gastrodia elata20.260
SRR5643514five period of Gastrodia elata23.970
SRR5643515five period of Gastrodia elata55.100
SRR5643524five period of Gastrodia elata44.690
SRR5643525five period of Gastrodia elata23.050
SRR5643528five period of Gastrodia elata217.870
SRR5643658five period of Gastrodia elata41.690
SRR5643659five period of Gastrodia elata46.560
SRR5643660five period of Gastrodia elata40.950
SRR5643661five period of Gastrodia elata51.000
SRR5643662five period of Gastrodia elata43.620
SRR5643663five period of Gastrodia elata29.690
SRR5643664five period of Gastrodia elata15.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.240
SRR6049655Rhizomagastrodiae_C368-T10_good_12.100
SRR6049656Rhizomagastrodiae_C368-T07_good_15.030
SRR6049657Rhizomagastrodiae_C368-T07_good_14.200
SRR6049658Rhizomagastrodiae_C368-T04_good_16.020
SRR6049659Rhizomagastrodiae_C368-T04_good_14.510
SRR6049660Rhizomagastrodiae_C368-T01_good_16.120
SRR6049661Rhizomagastrodiae_C368-T04_good_14.330
SRR6049662Rhizomagastrodiae_C368-T01_good_116.070
SRR6049663Rhizomagastrodiae_C368-T01_good_115.550
SRR6049664Rhizomagastrodiae_C368-T10_good_13.520
SRR6049665Rhizomagastrodiae_C368-T10_good_13.520
SRP279888GastroGastrodia elata tuber 11.16
JuvenJuvenile tuber14.24
Mother_GastroMother tuber of Gastrodia elata 220.64
Mother_JuvenMother tuber of Juvenile 228.63