Detail information of GWHGAAEX011018/evm.TU.scaffold_34.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19739.00E-110Chromatin remodeling protein, contains PHD Zn-finger
nrgi|743835420|ref|XP_010935809.1|6.33E-153PREDICTED: PHD finger protein ING2 [Elaeis guineensis]
Swissprottr|B3H615|ING2_ARATH3.00E-124PHD finger protein ING2
trEMBLtr|M0SWX7|M0SWX7_MUSAM4.00E-150PHD finger protein ING {ECO:0000256|RuleBase:RU361213}
TAIRAT1G543909.00E-110PHD finger protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003721880852222677-
Transcript Sequence

Network for GWHGAAEX011018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12998.6ING91181.40E-16
PF00628.28PHD2042525.00E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.080
SRR2545915Juvenile tuber18.910
SRP108465SRR5643513five period of Gastrodia elata17.350
SRR5643514five period of Gastrodia elata18.640
SRR5643515five period of Gastrodia elata16.290
SRR5643524five period of Gastrodia elata15.350
SRR5643525five period of Gastrodia elata15.420
SRR5643528five period of Gastrodia elata11.540
SRR5643658five period of Gastrodia elata14.660
SRR5643659five period of Gastrodia elata16.400
SRR5643660five period of Gastrodia elata15.860
SRR5643661five period of Gastrodia elata18.250
SRR5643662five period of Gastrodia elata11.780
SRR5643663five period of Gastrodia elata13.220
SRR5643664five period of Gastrodia elata12.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.760
SRR6049655Rhizomagastrodiae_C368-T10_good_122.170
SRR6049656Rhizomagastrodiae_C368-T07_good_118.260
SRR6049657Rhizomagastrodiae_C368-T07_good_115.150
SRR6049658Rhizomagastrodiae_C368-T04_good_113.440
SRR6049659Rhizomagastrodiae_C368-T04_good_111.600
SRR6049660Rhizomagastrodiae_C368-T01_good_112.990
SRR6049661Rhizomagastrodiae_C368-T04_good_112.840
SRR6049662Rhizomagastrodiae_C368-T01_good_116.760
SRR6049663Rhizomagastrodiae_C368-T01_good_115.490
SRR6049664Rhizomagastrodiae_C368-T10_good_123.550
SRR6049665Rhizomagastrodiae_C368-T10_good_123.550
SRP279888GastroGastrodia elata tuber 11.77
JuvenJuvenile tuber12.30
Mother_GastroMother tuber of Gastrodia elata 9.21
Mother_JuvenMother tuber of Juvenile 7.21