Gene detail

Detail information of GWHGAAEX011020/evm.TU.scaffold_34.49

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1888	Putative phosphoinositide phosphatase
nr	gi\|743840510\|ref\|XP_010937281.1\|	PREDICTED: phosphoinositide phosphatase SAC2 [Elaeis guineensis]
Swissprot	tr\|Q94A27\|SAC2_ARATH	Phosphoinositide phosphatase SAC2
trEMBL	tr\|W1P160\|W1P160_AMBTC	Uncharacterized protein {ECO:0000313\|EMBL:ERN00660.1}
TAIR	AT3G43220	Phosphoinositide phosphatase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000037	2634785	2650524	-

Transcript Sequence
>GWHTAAEX011020 GGGAGGGAGAGACGTGCTGCCGCAATACCTGATATCGTGATCTCATTTTCCAATAGAATTTTGGGCTCTGAAATAAAATATATAAAAAAAATAGTGTTAAATTGGTGTTCGTAGAATTCTAGTTCAAAGTCGTCCTCTTGGAGCTCAGGCTATTTTTTGTTTGTGGATCAAGGCGTCGCGGAAACTGTGGTAATCATTTGCGCTGCGATCCAGTCACCTCATTCCTTTGTTCAAAGTTCAAACCCGAATCTTTCATCCTTTCGATCCCTTTCCTTTTATTCTTACATCAGTCTTGCGGGTTTCGCTCGCCGGATTCCTGCCCGAAACCTTCTTTATTTGCAACCAACTCCAGATCTCCATTTATCGCTCTTTCTTTTGATTATTAGCTGCAATCGAATGAAGGATATGTATTAAGATTGGTGGGAGGATAAAGAAATGCTGTATTTGAAGCAGCCGAAGAGGGGTCTAGGTTTCCATCGGCCAGAACGACGATTGGCAGCCGTTGGATGCATTTGAACAGGGATCTGATGGAGCTAGGAGACTGCGCTGGGACCTTTCACCTGCAGAAGTTTAAGCTCTATGAAACTCGATCGAAATTTTACATGATTGGATGGGATAAGGCTAGGACAATATGGAAAGTTTTGTCGATTGACAGACTAGAGCCTTTTGAGCTGAACATTCGAGAGGATCCTACAGTATACACTGAAATTGAATGTGAAGATTTGCTAAGCAGAATACATAATGGAAACATGTCGAGTGGAGGGCTTAGGTTTGTTTCTAATTGTTATGGAATCATTGGTTTTGTGAAGTTCTTGGGACCCTACTACATGTTGGTTATTACAAAAAGGCGAAAAATTGGGGCCATATGTGGCCATACGGTTTTTGCCATCTCAAAGACTGAAATGATTGCAATTCCAAATTCTACTGTCCGGCTCTGTATACCATTCTCTAAGAATGAGAACAGATACAAGAAGCTTCTTTGCATGGTGGATCTCACAAGGGACTTCTTCTTTAGTTATTCTCTTAATATAATGCGCAGTCTTCAACAGAACTTATGCGATGTGATGTCTGGGCACATTCTGTATGAAACAATGTTTGTGTGGAATGAGTTTCTAACACGTGAAATTCGTAACCGACTGAAAAGCACATTGTGGACAGTTGCACTAGTATATGGATTTTTCAAACAGGCTATACTATCGATCGCTGGGAAAGATTTTATGTTCACACTTATTTCTAGGCGCTCACGTCATTATGCGGGCACAAGGTACTTAAAGCGTGGTGTCAATGAGAAAGGCAGAGTAGCAAATGAAGTTGAAACAGAACAGATTATTTTTGATGTGAGTTCTAAAATTCCTCCAGCAAAAATAAGTTCTGTTGTACAGATTAGGGGATCTATACCCCTTTTTTGGTCGCAAGATAGTTCATGGTTACATATGAAGCCTGATATCATCTTGCAGAAAGATCAAAATTATGAAGCAACAAGACTTCATTTTGACAATCTTGTTAAGAGATATGAAAACCCAATTATCATTTTCAATCTTATCAAGACAAATGAGAGACGGCCAAGAGAATCTATCCTGCGTGCAGAATTTGCTAAAGCCATTGATTTCATTAACAACGATCTCCCAGCAAAACACCATTTGAGATTCTTACATTGGGATCTTAGCAAACATTCTCAGAGAGCTAAAAATGTACTCGAGTTATTGGTCAAACTTGGAACAGATGCCCTGGGTTTGACAGGTTTTTTCTATTGCCAAGTGCCCTCTTCTTTAAGAATTTCTGGCCCTTTAAGCTTATCTTTCCTTGAGAATGATTTCATTTACAATAAAAACATTGATGCCGCCATACCTATAGATGGATGCCAGGATGTTACAGGAAACTGTGACTTCTTGTTGACGGATGCATCTCAGCGCAATGCTGATCAATCTAATTCTTTTCTCAAATTGGCTAATCTTCAAAAGGGCGTCCTCAGAACAAACTGTATTGATTGCCTGGATAGAACAAATGTGGCACAGTATGCCTACGGCTTAGCTGCCCTAGGTCAGCAGCTACATGTTTTGGACTTTATTGATGTTCCAATGATTGACTTAGGTTCCACTTTGTCTGATGACGTGATGGACCTCTATGAGAAAATGGGCGACACACTTTCCTTACAATATGGTGGCTCTGCTGCTCATAACAAGATATTCTGCGAGAGAAGAGGGCAATGGAAGGCAGCCACTCAGTCTCAGGAATTTTTTAGAACCGTCCAAAGATACTATAATAATACTTACATGGATCCACTAAAACAAGATGCCATAAATGTATTTTTAGGATACTTTCAACCACAAGAAGGTAAAGCAGCACTTTGGGAGCTTGACTCCGATCAACATTACAATATTGGGAGGCATGCCCCTCCATTTACTGATGAGAATATGAGATCATTATTTAAAAGATCCCTTTCGGAGGGAAATATTCTATGTGAAAGCAACTCGTCTGGTTCCATCTCTAACGATGAAGAGAGAAATCCTCAAAACCTGCACACCTCAGAAGCTAAGGGTTTTTCCGAGTCAACTCCAGAGATTTTGACTTGTGAAAGAGATGTATCCTACTCCAGGTATATTCCTGCAAGTTCTCGTAAGATGCAATTTGTGGATGGTGAACCTTGTTATTTCCAGCTTAAATTCGATGAATCAAGCTTTTCAAATTTTCTAGACCTTGACCGCATTTCATCTTCTGGAAATTCATGCGAAGAGGAATTCTATGAAAGGTCATTACTTTTGAGCTCTCCTGACGAGAAACTCTCCGCTGAAAACGTCATAAATATTGATTTAAATGCTGAAACGACTTCAACCTTAAGCTGGGAAGGCTCGAGCAAGAAGAACGGAGCAATTAGAGGGGCAGATCAATCCAGATTTCCCGAGAAATTTGTTCGTTGGGTTGACAATGGAGGAGCTCTTTGCTATTGATTGATCTCTTTATCTTTTATACATCAATACTATATCTATATTTATATACATATACACGTTGCAGCAGTTGGCTTCAATTGAAGGCTGGCGCACGATTAAGAACTCATCAACCGATAAAATGCGAGAAATTAACGACGACAGTAACCATTCAAAGAACTCTTCTCACCCTCTTTCTCTAAAGCTTCTTTATTTTTCTTGTTTTCTCTTTTGGTTTTTTGATGTTTATTAGGTTTTATAGATGCCATTCTTTCAATATTTGTTAGCTGTCATAATTATGAATGTGATGAGACCTACCATTCTCACACTTGTACATATATCATATGTTTGTATTTAACTATTTTCATTGCTTTATTGATATTAACATAAAGCCATTTTTTCAAATTCATTCCTACATTCAGATTATAATGCATTGAGTGTTACCATAAAGGAAAATGTTATATAATACGATTATCAGAAGTTGAAGTAGAATTTATGTTATTTTGAATAGCTTTG

Network for GWHGAAEX011020

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02383.17	Syja_N	94	390	3.20E-74

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K22913	FIG4	Metabolic pathways	map01100
K22913	FIG4	Inositol phosphate metabolism	map00562

Gene Ontology

GO term	Ontology	Name
GO:0042578	Molecular Function	phosphoric ester hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	50.210
SRP064423	SRR2545915	Juvenile tuber	41.790
SRP108465	SRR5643513	five period of Gastrodia elata	35.820
	SRR5643514	five period of Gastrodia elata	40.430
	SRR5643515	five period of Gastrodia elata	44.960
	SRR5643524	five period of Gastrodia elata	39.200
	SRR5643525	five period of Gastrodia elata	50.300
	SRR5643528	five period of Gastrodia elata	54.370
	SRR5643658	five period of Gastrodia elata	51.720
	SRR5643659	five period of Gastrodia elata	36.650
	SRR5643660	five period of Gastrodia elata	37.930
	SRR5643661	five period of Gastrodia elata	33.410
	SRR5643662	five period of Gastrodia elata	30.990
	SRR5643663	five period of Gastrodia elata	36.400
	SRR5643664	five period of Gastrodia elata	37.870
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	51.440
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	49.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	49.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	60.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	77.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	81.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	65.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	68.420
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	58.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.430
SRP279888	Gastro	Gastrodia elata tuber	56.48
	Juven	Juvenile tuber	49.31
	Mother_Gastro	Mother tuber of Gastrodia elata	76.01
	Mother_Juven	Mother tuber of Juvenile	76.55