Gene detail

Detail information of GWHGAAEX011031/evm.TU.scaffold_34.65

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672108028\|ref\|XP_008783000.1\|	0	PREDICTED: uncharacterized protein LOC103702361 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0RQQ6\|M0RQQ6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P09260_001}
TAIR	AT1G72390	2.00E-93	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000037	3253978	3311406	+

Transcript Sequence
>GWHTAAEX011031 GCTAATTCCAGTTATAGCTACAAACTCGTCTGCCTCTCTTCCCGGGAAGAAAAACACCATTTATCTCGTCTGGGCGTTGGCTAGGGTTTTCGCGTGCTGATTGAAAGGGGCACAATGGGAGTTTCCTTCAAGGTATCTAAGGTTGGCAAGAGGTATGTCCCCAAACCAATTGCCGAGCAGGCGGAGTGCTCTCCCAGCGAGAGCTCGAAGAATTCCCATACCCTCAATGGACCGGCATCAAAGAATAAAGCAGATATTACAGAATCTGGAAATGAATTTTCTGGTTCTAAAGCATCTGAATTTTCAGAACATGATGTATCATTCACTTTAAATCTTTTGCCAGGCGGATACTTTATTGGGAGGCTATCCAAGGTGGGAAATTTTCAACCTTTGCTGCAAGATGTGAAGTCATTGCATCCATATGATAAGGCTTCAAAATTTCTTTTTTCTGCTATTGAGACAGGCTGGCTTCCAGGAAATATTCTTGACGATATAACTTGCAAATATATAAATGGAGCTACCATCTGCGAGGTACGTGATTATAGAAAGTGTATACTTGAATCAGGAGCTATTGCTCCTAGTGATGCTGTTCCTGTTATAAACAGGATTCGACTTCGGATGTCCCTAGAAAATGTTGTTAAGGATATTCCTTTGATAGCGGATGACACCTGGACTTACAGTGATATTTTGGAAGTTGAGTCACGAATATTGAAAGCCTTACAACCAAAGCTTGATTTAGCCCCAATTCCTAAGTTGGACAGGCTTTGTGCTGATCCTACTATCATTAAGCTTAATATTGATTTTGCAAGGAAGAAAAGGCTTCGGCCTACCACTGAAGTCACAAATACCTCCAAAAATCAACTTCACGGGAAGAAGATTTTCATTGATGGAGCATCCGAAATTGCTAACAGTGCAGGTGATTCAGGATCTGTGTTAAGCAATGTTGCTATGCAACACGTCCATGAGAATGCAACTGCTCAGCCAGGAATGATTTCATCCTCTCGAACAACTAATTCCTTACTCGAAGCTGCTAGGCCAACTTTAGAAGTTTCAGGTAATCCAAAGTTTCAGTCTGCCATCAACCATGCAGGAGTGATTCAGGATCATGGTTTATCTCCTGCAAATTATGCTTGTGCCAATGCCAGCATTTCATTACCTCAGAATATGGTTAGTTCATATGCAGACCCTCCCAATGCTAGTTTCTCTCTTCATGGAAGAAGGGAAATTCAAGATCCCCAATCAGTTTCGATGCAAGGTTTAAAGCGACCAAGACCTACTATCACTTGTCTAGATGGTGTTACGACTCAGTCGACAGCTCCTCCACTTGGTGGCTTTAGTGGATCAGATGTGCATTGGAAGAACCAGGCCGCCCATCCACAGATTGATCCCAAAGGGTTTCAGTACTCCAATGTTGGGGTCCCAAGATTTTCTGCGATGAACCCGGATGCAGTGACATCTATTTATTTTAGTCAGCAGGCAATGAGATATGGACACAAAGAGGAACATGTTGATTCAGATAAGCTGGATAAACAAGAACTTGAGAATTCCAAGGATTCCCTGCAGGCAATGACTGCTGAAAATTCTTTGGATCAGAACCAATTGCGCACCCAGCATCAAGCACAGCAGTCTTCCGTGAGAAGCCATCTCCCACCTCCTACACAATGGCATAACCCACGGCTGCCCATTGAGAAGGATATGAAAAAGGATGACATGCTACAAAAACAAAAAACTTTGCCCAGCCCACGTGTTTCTTCTGGACCAATGGTTCAATCTCCAATGTCATCAAAATCAGGAGAGATATCTAGTGGTTCAGTTGGTGGTCAATACAGTGCAATGGCAGCAACTTCTGCACTGACACCACAATTAGAAAAAGTTCCAACAAACTCAAATAATGCACTTGGAGCCCTTTCAGTTGCTTCTAGTCCCAGTGATTCAGTACACAGACAACCCCAAGCATCTGCTGCTTTAAAACGTAAAGCTAATTCTGTTCCTAAAACACAAGCCATGAGCGGGGTTGGATCTCCTGCTAGCGTGAGTAATTTTAATACTCCATCGAATGCTAATAGCCCGTCAATAGGAACATCGTCTATGGCTGATCAAGTGCTAATGGATCGGTTTGCAAAGATTGAAATGGCAACCCAAAGATTCCAGCTTAATGCCAGAAAAAACAAGGTTGAAAATTATCCTGCAAGGAAGCCTCGATCGTATTCATGCCAGCAGGTTGCAGTCACCCTATCAAATTCTTTGAATTCTGAGGATTTTACAAATCCGACGGATTCTCTTTCAAGGTCTATTTGTGGTGGAAATATTAACACTTGCAAGACAAGATTGATAACATTCATTCGCCCTGAACTCAACTATCAAGCTGTTCCTGGGCGAACCGCGAGCCGGTTGATTATGTGTGAGAAGCCCTTCGATGGCACAGTGGCTATGCAATATGGTGACAAAGATGATTCTGATCTGCCCAGTTCTATAGATTGTTGGCTTACACTTCCCACTACACACTTTGCAGATCTTCTTGCCACACAGTTCTGTGCGCTGATGGACCGCGATGGTCATCATAAAGCCGACGATCAAGTGTTTCAAGCTCGAACCCCCCCTATTGGGGCTCGCATAACTGCTGCTTCAGGCAGTCAATCTCTAGTTCCTGGAATGTCGACAGAGAACACTACATCTGGGGGAAAGCATACAGATTTAGCCAATCCTGCCCCATTGCCTAATGCTGTGGCTCCTAATAATAGTGGAATGGCCCCGATGAACCCACACAGTCTTTCCAACAATTCCGGAATGCTGTCCCCAGTAAGCAACAGCGGTGCCCAGACCTTGCCCAATTCACAGGGCTATATGCCAGGGCAGGGAATCCCTGCCAGAAACCATCAGCTTGATCAACCACTGCTTCAGCACCAGCAGCAGCTGCAAAACTCTCAATCCCAATTGCAGCAGCAGCAGCAGCTCCCACACCCTCACATCCAGAGATCTTCTTCACTTCTCTCTAACAATCCTCTGTCTCATTTGATTGGGCAGAACTCAAACATGCAAATGGGCTCTAGTCCTGTTGGGAGCAGCAAGCCTGCTCACATTCAACTCCAGATGCAACAGCAGCAGCAGCAACAGATTCCTAGGAAAGTGATGATGGGGCTCGGTGCCGCCATTGGTATGGGGAGCATGGGCAATAGCATGGCGGGAATTTCGGGCCTCGGCAACGTCATTGGCATGGGGGGAATGCGTGGCTTGTCCTCCCAAATGGCTGCACTTCCCACTCTCGGTAGTGTCAACCCCAACCAGATGCTTCCTTCCTCAGCACCATCCAGTTTCAATGCCGGCATCCGCCCAGCTTCCTTGACTCCCTCTCATGCTGCCGCTGCAATGGCATCAAAGTTTAGAATGTCTGTGGGTAACACCAGAGGAGGGGGTGGCATGTATGGCCCCGCTCCGGCTGCCGGTATTGCCAGCAACGTGCCTGGGAACAACAATCAGACAGGCTTGTCCATGCTGAACCACGCACTGAATCGAACCAACATGAGTGTTTTACAGTCCAATGCTAGCATGGCATCCATGGGACCCCCCAAGATTTCGGGCCCCAACTTCTACGTGAACCAACAGCAGCTGCAGCTACAGCTACAGCAGCAGCAACAACGTTTACAGCAGCAGCAGTTGCAGCAGCAGCAGTTGCAGCAGCAGCAGATAAGCTCTCCTCTACAGCAATCGCAGGTCACTTCTCCATCACTTGGTGGTTCTCCTTCAGCTCTTGTTATGCAGCAGCAGCAGCAACAGATTAATCCCCAGCAGACTTCATTAAGTCCCCAGCAATATAGCTCCGCTGCTCTTCCGCACATCACCAGTAGTGGTTTAGTGGGTGCGCCACCTAATAGTCCACAATTGAGCTCACAAACGCATGGGCCCATTGGCAATATCACCAGCTCGCCCATGGAACAGCTACAGGCCGCAGCAAATAAGGGGCAATAAATCTGGGCCTTTTGGGTTTTTCTCCTTTTTGTATTTGAATGTTGATTCTGTTCTGTCCGTCATTATGAAATGATGGCCAATATAATGAATAAACCGAGCATAGTTGTTAAATAATTTACTGTAAGAGCTTGGTTTTGTTTAAATATCAGCAGCTTTACTAGCATAAGCTGATTGAGCTGAAAGAATAAACAGCTTAATGGCTGGCCTCATTTTACTCACTGAAATCTGGCAATTATGTCTTACATTTTGTCTGCAAGTTTTATAGCCTACAAACAAGATATAAAAGTCCCACATTTTGGG

Network for GWHGAAEX011031

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011031
MGVSFKVSKVGKRYVPKPIAEQAECSPSESSKNSHTLNGPASKNKADITESGNEFSGSKASEFSEHDVSFTLNLLPGGYFIGRLSKVGNFQPLLQDVKSLHPYDKASKFLFSAIETGWLPGNILDDITCKYINGATICEVRDYRKCILESGAIAPSDAVPVINRIRLRMSLENVVKDIPLIADDTWTYSDILEVESRILKALQPKLDLAPIPKLDRLCADPTIIKLNIDFARKKRLRPTTEVTNTSKNQLHGKKIFIDGASEIANSAGDSGSVLSNVAMQHVHENATAQPGMISSSRTTNSLLEAARPTLEVSGNPKFQSAINHAGVIQDHGLSPANYACANASISLPQNMVSSYADPPNASFSLHGRREIQDPQSVSMQGLKRPRPTITCLDGVTTQSTAPPLGGFSGSDVHWKNQAAHPQIDPKGFQYSNVGVPRFSAMNPDAVTSIYFSQQAMRYGHKEEHVDSDKLDKQELENSKDSLQAMTAENSLDQNQLRTQHQAQQSSVRSHLPPPTQWHNPRLPIEKDMKKDDMLQKQKTLPSPRVSSGPMVQSPMSSKSGEISSGSVGGQYSAMAATSALTPQLEKVPTNSNNALGALSVASSPSDSVHRQPQASAALKRKANSVPKTQAMSGVGSPASVSNFNTPSNANSPSIGTSSMADQVLMDRFAKIEMATQRFQLNARKNKVENYPARKPRSYSCQQVAVTLSNSLNSEDFTNPTDSLSRSICGGNINTCKTRLITFIRPELNYQAVPGRTASRLIMCEKPFDGTVAMQYGDKDDSDLPSSIDCWLTLPTTHFADLLATQFCALMDRDGHHKADDQVFQARTPPIGARITAASGSQSLVPGMSTENTTSGGKHTDLANPAPLPNAVAPNNSGMAPMNPHSLSNNSGMLSPVSNSGAQTLPNSQGYMPGQGIPARNHQLDQPLLQHQQQLQNSQSQLQQQQQLPHPHIQRSSSLLSNNPLSHLIGQNSNMQMGSSPVGSSKPAHIQLQMQQQQQQQIPRKVMMGLGAAIGMGSMGNSMAGISGLGNVIGMGGMRGLSSQMAALPTLGSVNPNQMLPSSAPSSFNAGIRPASLTPSHAAAAMASKFRMSVGNTRGGGGMYGPAPAAGIASNVPGNNNQTGLSMLNHALNRTNMSVLQSNASMASMGPPKISGPNFYVNQQQLQLQLQQQQQRLQQQQLQQQQLQQQQISSPLQQSQVTSPSLGGSPSALVMQQQQQQINPQQTSLSPQQYSSAALPHITSSGLVGAPPNSPQLSSQTHGPIGNITSSPMEQLQAAANKGQ

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.730
SRP064423	SRR2545915	Juvenile tuber	36.870
SRP108465	SRR5643513	five period of Gastrodia elata	13.610
	SRR5643514	five period of Gastrodia elata	12.430
	SRR5643515	five period of Gastrodia elata	13.280
	SRR5643524	five period of Gastrodia elata	12.340
	SRR5643525	five period of Gastrodia elata	13.430
	SRR5643528	five period of Gastrodia elata	11.340
	SRR5643658	five period of Gastrodia elata	16.330
	SRR5643659	five period of Gastrodia elata	17.030
	SRR5643660	five period of Gastrodia elata	23.330
	SRR5643661	five period of Gastrodia elata	18.500
	SRR5643662	five period of Gastrodia elata	17.920
	SRR5643663	five period of Gastrodia elata	20.330
	SRR5643664	five period of Gastrodia elata	25.640
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.030
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.620
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	44.540
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	31.440
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.140
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.040
SRP279888	Gastro	Gastrodia elata tuber	25.73
	Juven	Juvenile tuber	27.21
	Mother_Gastro	Mother tuber of Gastrodia elata	18.57
	Mother_Juven	Mother tuber of Juvenile	23.30