Detail information of GWHGAAEX011034/evm.TU.scaffold_34.69
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434391665|ref|YP_007126612.1| | 1.00E-30 | Unspecific monooxygenase [Gloeocapsa sp. PCC 7428] |
| KOG | KOG0156 | 7.00E-125 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743763118|ref|XP_010911323.1| | 3.91E-156 | PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis] |
| Swissprot | tr|Q9LIP5|C71BW_ARATH | 2.00E-125 | Cytochrome P450 71B35 |
| trEMBL | tr|I6LM44|I6LM44_ELAGV | 2.00E-148 | P450 {ECO:0000313|EMBL:ADM88550.1} |
| TAIR | AT3G26310 | 7.00E-125 | cytochrome P450, family 71, subfamily B, polypeptide 35 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000037 | 3444665 | 3472111 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011034
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 37 | 471 | 1.00E-90 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B37 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.330 |
| SRR2545915 | Juvenile tuber | 7.290 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 39.520 |
| SRR5643514 | five period of Gastrodia elata | 32.800 | |
| SRR5643515 | five period of Gastrodia elata | 31.740 | |
| SRR5643524 | five period of Gastrodia elata | 42.280 | |
| SRR5643525 | five period of Gastrodia elata | 25.360 | |
| SRR5643528 | five period of Gastrodia elata | 42.820 | |
| SRR5643658 | five period of Gastrodia elata | 31.640 | |
| SRR5643659 | five period of Gastrodia elata | 5.820 | |
| SRR5643660 | five period of Gastrodia elata | 8.640 | |
| SRR5643661 | five period of Gastrodia elata | 7.210 | |
| SRR5643662 | five period of Gastrodia elata | 6.610 | |
| SRR5643663 | five period of Gastrodia elata | 7.470 | |
| SRR5643664 | five period of Gastrodia elata | 5.680 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.020 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 42.970 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 36.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.690 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 28.370 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.530 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.440 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.080 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 45.750 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 68.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 68.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.42 |
| Juven | Juvenile tuber | 16.50 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 37.96 | |
| Mother_Juven | Mother tuber of Juvenile | 37.69 |