Detail information of GWHGAAEX011036/evm.TU.scaffold_34.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695010097|ref|XP_009391708.1|2.04E-85PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q6K7E6|ERF1_ORYSJ3.00E-53Ethylene-responsive transcription factor 1
trEMBLtr|D5L139|D5L139_MALDO5.00E-84AP2 domain class transcription factor {ECO:0000313|EMBL:ADE41148.1}
TAIRAT1G539105.00E-39related to AP2 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003735805413583144+
Transcript Sequence

Network for GWHGAAEX011036

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP21331821.90E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms156.780
SRR2545915Juvenile tuber195.670
SRP108465SRR5643513five period of Gastrodia elata109.400
SRR5643514five period of Gastrodia elata121.880
SRR5643515five period of Gastrodia elata84.130
SRR5643524five period of Gastrodia elata98.470
SRR5643525five period of Gastrodia elata108.270
SRR5643528five period of Gastrodia elata69.730
SRR5643658five period of Gastrodia elata73.860
SRR5643659five period of Gastrodia elata70.850
SRR5643660five period of Gastrodia elata77.310
SRR5643661five period of Gastrodia elata62.590
SRR5643662five period of Gastrodia elata58.280
SRR5643663five period of Gastrodia elata72.150
SRR5643664five period of Gastrodia elata65.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_181.320
SRR6049655Rhizomagastrodiae_C368-T10_good_1142.160
SRR6049656Rhizomagastrodiae_C368-T07_good_183.270
SRR6049657Rhizomagastrodiae_C368-T07_good_157.940
SRR6049658Rhizomagastrodiae_C368-T04_good_141.090
SRR6049659Rhizomagastrodiae_C368-T04_good_141.000
SRR6049660Rhizomagastrodiae_C368-T01_good_140.360
SRR6049661Rhizomagastrodiae_C368-T04_good_135.460
SRR6049662Rhizomagastrodiae_C368-T01_good_158.570
SRR6049663Rhizomagastrodiae_C368-T01_good_145.270
SRR6049664Rhizomagastrodiae_C368-T10_good_1142.960
SRR6049665Rhizomagastrodiae_C368-T10_good_1142.960
SRP279888GastroGastrodia elata tuber 51.95
JuvenJuvenile tuber106.55
Mother_GastroMother tuber of Gastrodia elata 73.24
Mother_JuvenMother tuber of Juvenile 65.61