Detail information of GWHGAAEX011038/evm.TU.scaffold_34.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|257063813|ref|YP_003143485.1|6.00E-13signal peptidase I [Slackia heliotrinireducens DSM 20476]
KOGKOG01715.00E-57Mitochondrial inner membrane protease, subunit IMP1
nrgi|695022115|ref|XP_009398173.1|6.54E-82PREDICTED: mitochondrial inner membrane protease subunit 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|O04348|TPP1_ARATH2.00E-08Thylakoidal processing peptidase 1, chloroplastic (Precursor)
trEMBLtr|M0SRL7|M0SRL7_MUSAM2.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P24060_001}
TAIRAT1G535305.00E-57Peptidase S24/S26A/S26B/S26C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003736496533650658-
Transcript Sequence

Network for GWHGAAEX011038

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00717.22Peptidase_S24521161.40E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09647IMP1 Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008236Molecular Functionserine-type peptidase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.860
SRR2545915Juvenile tuber16.860
SRP108465SRR5643513five period of Gastrodia elata13.150
SRR5643514five period of Gastrodia elata13.930
SRR5643515five period of Gastrodia elata13.230
SRR5643524five period of Gastrodia elata13.710
SRR5643525five period of Gastrodia elata21.500
SRR5643528five period of Gastrodia elata21.040
SRR5643658five period of Gastrodia elata19.350
SRR5643659five period of Gastrodia elata19.570
SRR5643660five period of Gastrodia elata20.170
SRR5643661five period of Gastrodia elata18.250
SRR5643662five period of Gastrodia elata15.660
SRR5643663five period of Gastrodia elata15.900
SRR5643664five period of Gastrodia elata15.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.150
SRR6049655Rhizomagastrodiae_C368-T10_good_113.310
SRR6049656Rhizomagastrodiae_C368-T07_good_120.250
SRR6049657Rhizomagastrodiae_C368-T07_good_118.420
SRR6049658Rhizomagastrodiae_C368-T04_good_126.410
SRR6049659Rhizomagastrodiae_C368-T04_good_126.610
SRR6049660Rhizomagastrodiae_C368-T01_good_124.270
SRR6049661Rhizomagastrodiae_C368-T04_good_123.830
SRR6049662Rhizomagastrodiae_C368-T01_good_122.140
SRR6049663Rhizomagastrodiae_C368-T01_good_123.840
SRR6049664Rhizomagastrodiae_C368-T10_good_121.670
SRR6049665Rhizomagastrodiae_C368-T10_good_121.670
SRP279888GastroGastrodia elata tuber 35.67
JuvenJuvenile tuber12.53
Mother_GastroMother tuber of Gastrodia elata 20.06
Mother_JuvenMother tuber of Juvenile 14.66