Gene detail

Detail information of GWHGAAEX011069/evm.TU.scaffold_34.129

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2084	9.00E-172	Predicted histone tail methylase containing SET domain
nr	gi\|743872914\|ref\|XP_010906681.1\|	0	PREDICTED: histone-lysine N-methyltransferase ATXR2 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q5PP37\|ATXR2_ARATH	0	Histone-lysine N-methyltransferase ATXR2
trEMBL	tr\|A0A061E2M7\|A0A061E2M7_THECC	0	Histone-lysine N-methyltransferase ATXR2 isoform 1 {ECO:0000313\|EMBL:EOX99170.1}
TAIR	AT3G21820	9.00E-172	histone-lysine N-methyltransferase ATXR2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000037	6162706	6225582	-

Transcript Sequence
>GWHTAAEX011069 ATGGAGACGCAAAGAGACGAAGAAGAGACGTTCAATCCAGTCGACAAAGAAATCCCAGCAGTTCAGGAATATTATGATGAGATCAAGCATAAAGAAAATTGTCACTCTGTTAGAATAGAAACCAACAAGGAGCATGGAAAAGGTGTCTTTGCAAATAGAGAATTTGAGGAAGAGGAGCTTATATTTAAGGATCAAATGCTTGTGGCTACTCAGCATACTTTTAACAAGGTTGATTGTTTTGTGTGTAACTCTTGCTTTCGGTTCATTGGTTCATTAGAACTTCAAATTGGTCGAAAACTCTATTTACAAAGTTTGGGAGTGTCAGTTAAAAAGGACTGTGATCACCAGAGCTTTTCTATTGAAGCAACAGGAACATGTTCATTAGAGTCTTCAAATGAAAATGATTTGACCCTTCTGCAAAATAGTAATAATGCAGGACAAAGTTTTTGTAGAAAAAATTCTCTCTCAAAGGAGACTTTGGAGTTGTTAATGAATGACAAGCTGCCTTTACCTTTCTCAAAACAGTTTCTCTTGCCTCCAATTTTTCCTTGCTCTGGGGGCTGTGAAGAAGAACATTATTGCAGCCAACAATGTGCATACTACGACTGTGAATCTATTCATTCTTTATTGTGCATTGGGAAGAGCTCAGGATCCTCACATCAGGCTGCAATTGTTAAATTTTTTGAATATGCTAACAAAACAAATGATATTTTCATACTAGCTGCAAAGGCGATCTCATTGACAATTCTGCGTTATAGAAGGCTAAAAAAATCCTGTTCTTATAGTAGTAAGAGGTCCATCCTGCACAATTCAGCAAATGATTCTAATTTATCTTTGCTTTTGGAGGCTTGGAAGCCAATTGCAATGGGATTTAAAAGAAGGTGGTGGGACTGTATTGCCTTGCCAGATGATGTTGATGCTTATGATGAAATATTATTTAGAAAGCAAATAAGAGATTTGGCATATTCATCTCTGCAACTTCTGAAAGAAGCCATCTTTGATATTGAGTGTGCACCTTTGTTTTCGCTTGAAATATATGGCCATATTATTGGAATGTTTGAGCTCAACAATCTTGATCTTGTTGTTGCATCACCAGTGGAGGACTACTTTATATATGTTGATGATCTTCCATCCCCAGAAAAGGAAGAAGCTGAGAAGCTAACGCACCCTTTTTTGGATGCACTTGGTGATGATTATTCAGTTTGCTGTCAAGGTAGTGCATTCTTCCCTATCCAAAGTTGCATGAATCATTCGTGTTGCCCAAATGCTAAAGCATTTAAGCGGGATGAGGACAAAGATGGACAAGCAGTAATAATTGCGGCCCGCCCAATTTTCATAGGAGATGAGATTACTATTTCATATATTGATGAGAACCTTCCGTACGAGGAGAGACAAGCTCTGCTGGCTGACTATGGCTTCAAATGCAACTGCCCAAAGTGCAGAACGGAGCAATCATTTGGGTATGAGTCTATTTCGAGCAGGCTGGTTCAATATTAATGCATCATGTGATGAGGTACTTAAGAACCCGAATATCTGGTAGCCACATTTCCCACAAACACAATAAGCTGTATGCAGAATTTTTGTTGTTGTTGAAGTTAAAATATAGATCTTAATGCTGTATGAATTTCTTATGCCTGCATATTTTCTTAATTGCAAGTGTTCTGAAAATAAAATTGTATGTGTGATGACCTGATGTTAAGGTAGAGCATACTAACCTAACATTATGTGCCAAGCTGCATTATCATATCGGGTATTTAACCAAATTAGCATTAGAACAAATATTCATTCACAAAACCATTCAAATAGCATAGATTTCTATCCAATATAACTTATCATATATTGTATGGTATATTTAATAGTTGTGGTGAACGGGGATAAAATATGCATATAAATAAATAAAAGGCATTTCAAAAGAACTAATGAATCGATCTTCTTTCTTCGCAAAACAATATTAG

Network for GWHGAAEX011069

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00856.27	SET	46	454	9.00E-10

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.910
SRP064423	SRR2545915	Juvenile tuber	4.330
SRP108465	SRR5643513	five period of Gastrodia elata	4.530
	SRR5643514	five period of Gastrodia elata	4.310
	SRR5643515	five period of Gastrodia elata	4.330
	SRR5643524	five period of Gastrodia elata	4.200
	SRR5643525	five period of Gastrodia elata	2.750
	SRR5643528	five period of Gastrodia elata	2.490
	SRR5643658	five period of Gastrodia elata	1.750
	SRR5643659	five period of Gastrodia elata	3.380
	SRR5643660	five period of Gastrodia elata	4.250
	SRR5643661	five period of Gastrodia elata	3.670
	SRR5643662	five period of Gastrodia elata	2.410
	SRR5643663	five period of Gastrodia elata	3.860
	SRR5643664	five period of Gastrodia elata	3.110
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.850
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.050
SRP279888	Gastro	Gastrodia elata tuber	7.23
	Juven	Juvenile tuber	8.26
	Mother_Gastro	Mother tuber of Gastrodia elata	6.20
	Mother_Juven	Mother tuber of Juvenile	6.21