Gene detail

Detail information of GWHGAAEX011071/evm.TU.scaffold_340.1

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0254	2.00E-104	Predicted transporter (major facilitator superfamily)
nr	gi\|743885000\|ref\|XP_010909820.1\|	2.02E-154	PREDICTED: monosaccharide-sensing protein 2-like [Elaeis guineensis]
Swissprot	tr\|Q8LPQ8\|MSSP2_ARATH	6.00E-105	Monosaccharide-sensing protein 2
trEMBL	tr\|M0SYW6\|M0SYW6_MUSAM	8.00E-143	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P15870_001}
TAIR	AT4G35300	2.00E-104	tonoplast monosaccharide transporter2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000334	3545	9718	-

Transcript Sequence
>GWHTAAEX011071 ATGATTAATACCGAATCCTTTATTCATGTGTTTTTTGAAAGCAAAGTAGTGGTTACATTTGGCAGAACTGCTCTCTTGCCCCCCTCCCCACGGCTGTTTCCACAGTCGATATTTTTCTTTGCTGGCCAACGATTCTTCCTTTTTTGTGGTCTTGGTCCGAGGGAAGAGGTCTCCTTTTGGGGCTGTCCTTTAGGCCGGCCAGGTTTGGTGCTTTGGCTTATAATGTTGGGTGGCGTTGTCTGGTCTCTTTGGCGTTTGGCTGGTGCTGCTGCCGATTGGGGGTCGGCATCTGGTTCTTGGCTGGATTTAAAATTGTTCCTTTATGCTTGTCCAGATTTTAGGGATGGCATTTGCCTCTCGTTTGGTTGTTTGGCGTTATTTGCTGCTGAGGTTGTTTGGCCTTTGGGGTTGGTGGAGCCTGGTTTTCGGGGTGTCTTTGGCTGGGCGGGGCTGGAGAAGCTGGCTGCCCAGGTCAGGCATTTTGGTTGGTATTGTTGGCTGATGTTTGCCCGTCTGGTGGCAAATGCCATTTGGGGGTGGCGGTTATGCTCTCTGGTTTCCTCCTTGTTTTGGTTTGGTGATGTTTGTTTCAGGTTGCTGAGCGAAGCTCTTGGGCTGGTATCTCTGCTGTCCTTCTGTCTCCCTGAGCCTATTTTTTTCGGGGTCCGTCTGTTGGGGCTGGTGATTCTGGCAGGAGAGCTGGCTCTTCTCGTGGAAGGTCTAGGCGTTGGTGCAGATATTTCTATTGAGGAGTACATTGTTGGTCCTGCTAATGAGATCATTGATAATCAGGAACAGGATGGTGACAAGGAACACATCATTCTCTATGGCCCCGAAGAGGGCCTTTCTTGGGTTGCCCGCCCTGTAAAGGGGCAGAGCGGCCATGGAAGTACCCTTGGTGTTGTTTCTCGTCATGGAAGCAGCTTGGAGATACAGGGAAGTATTCCCCTAATGGATCCTCTTGTTACTCTCTTCGGCAGTGTGCATGAAAAACTACCCGCTCCTAATATGGGCAGCACGAGAAGCACTCTGTTCCCTAATTTTGGCAGCATGTTTAGTGTTGCGGGCCCCAAAACTGAGCAGTGGGATGAAGAGACCGGCCAGAGAGAGGATGATGATTATGCGTCTGATGCTACAGGAACTGATTTTGACGATAATTTACAAAGTCCGCTACTCTCTCGTCAGGGAACGAGCATGGAGAAGGACGCCGTGCCCCCGCATGCTGCTCATGGGAGCATATTGAGCACGAGAAGGGATGGTGGTGGTGAGTCAATGGGCATTGGCGGTGGCTGGCAGTTGGCATGGAAATGGTCGGAGCGAGAGGGCCTTGATGGGAGTAAGGAAGGAGGATTCAAGAGAATTTATTTGCATCAGGAGGGTGCACCTTATTCTAGAAGGGGCTCACTTGTTTCACTTCCGGGTCAAGAAGTTCTGGAAGAGAGTGAATTTATCCAGGCTGCTGCATTGGTGAGCCAGCCTGCACTTTACTCTAAGGAGCTTCTGGAGCAGCACCCTGTTGGACCAGCTATGATCCATCCAATGGAAACAGTTGCTGCAAGTTCTGTGTGGGCGGACCTCTTTGAACCAGGTGTCAAGCAAGCATTGATTGTTGGTATTGGAATCCAAATTCTGCAACAGCCCGAGCCCACCTCCACGCAGCCCAGCCCACTTGCCTACTCATCCCACTCCCACCAAACCTACAGCTTTGGGCCAGGCCCGGCCCTCTCAGTTGCTGCGTCGGCCGAGCGTCTTGGGCCGGCCTGCTAG

Network for GWHGAAEX011071

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.070
SRP064423	SRR2545915	Juvenile tuber	1.240
SRP108465	SRR5643513	five period of Gastrodia elata	3.130
	SRR5643514	five period of Gastrodia elata	3.990
	SRR5643515	five period of Gastrodia elata	2.540
	SRR5643524	five period of Gastrodia elata	2.780
	SRR5643525	five period of Gastrodia elata	3.490
	SRR5643528	five period of Gastrodia elata	1.830
	SRR5643658	five period of Gastrodia elata	3.170
	SRR5643659	five period of Gastrodia elata	3.520
	SRR5643660	five period of Gastrodia elata	3.430
	SRR5643661	five period of Gastrodia elata	3.620
	SRR5643662	five period of Gastrodia elata	3.630
	SRR5643663	five period of Gastrodia elata	4.420
	SRR5643664	five period of Gastrodia elata	4.050
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.320
SRP279888	Gastro	Gastrodia elata tuber	2.56
	Juven	Juvenile tuber	4.02
	Mother_Gastro	Mother tuber of Gastrodia elata	0.94
	Mother_Juven	Mother tuber of Juvenile	1.12