Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG4197	8.00E-54	FOG: PPR repeat
nr	gi\|743879440\|ref\|XP_010908404.1\|	2.33E-64	PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Elaeis guineensis]
Swissprot	tr\|Q9FLD8\|PP408_ARATH	2.00E-54	Pentatricopeptide repeat-containing protein At5g39980, chloroplastic (Precursor)
trEMBL	tr\|K7LRW9\|K7LRW9_SOYBN	8.00E-60	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G36430.2}
trEMBL	tr\|K7LRW9\|K7LRW9_SOYBN	9.00E-16	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G36430.2}
trEMBL	tr\|K7LRW9\|K7LRW9_SOYBN	3.00E-12	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G36430.2}
TAIR	AT5G39980	8.00E-54	Tetratricopeptide repeat (TPR)-like superfamily protein

Scaffold	Start	End	Strand
GWHAAEX00000341	90632	91273	+

Transcript Sequence
>GWHTAAEX011082 ATGGAGTTCGACTCCATCTCTCCCGACCTCGTCCTCGACACCACCCTCATCTTGCTCTCCCTCCACCTCAACAACCCTTCCAAAGCCCTAGTACTATACTTTCGTCTCCGCTCTTCCGGCCTCTCCCTCGACCTCATTCCCCACAACACTCTTCTCTATGCTCTATCCCGCTTCGGCCTCCTACACCACGCCCGCCGCATTCTCCTCTCCGACATGGATGCCGCCAGCGTCCCGCCCAACACCATCTCCTTCTCCACCGTCCTCTCCTCCCTCTCCTTCCATCGGCGCTTCTCCGAAGCCATCTCCCTTTTTTCTGAGATGCTCCGTCGCCGGCTTCCCTTAGATCCCCCGGTCTGCAACATCACCCTCCACGCCTACGGAAGCCTCAGCATGCCCAGCAAAGCTGCTTGCCTCTTCCGGAGCATGCGCCGCCTTGGCGTTACTCCCTCCCTCGTCACCTACAACACCATGCTCCGGATCTATGGTGAATCCGGCCTTTTCTCCGACGCCATCCACCTCTTCCGCCTCATGCAAAAGCATGACATCTTCCCCAACGTCGTGGCGTACAACACCATGATCGGCAACTACGGCAAATCCCTCGAGCACCAGAAGGTTGGGAGCGTCTTTGCCGACGTGTATTGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01535.19	PPR	82	111	7.20E-05
PF01535.19	PPR	119	147	0.027
PF13041.5	PPR_2	149	195	1.20E-12

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.330
	SRR5643514	five period of Gastrodia elata	0.250
	SRR5643515	five period of Gastrodia elata	0.930
	SRR5643524	five period of Gastrodia elata	0.960
	SRR5643525	five period of Gastrodia elata	0.690
	SRR5643528	five period of Gastrodia elata	0.170
	SRR5643658	five period of Gastrodia elata	0.380
	SRR5643659	five period of Gastrodia elata	0.140
	SRR5643660	five period of Gastrodia elata	0.300
	SRR5643661	five period of Gastrodia elata	0.750
	SRR5643662	five period of Gastrodia elata	0.750
	SRR5643663	five period of Gastrodia elata	0.570
	SRR5643664	five period of Gastrodia elata	0.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.110
SRP279888	Gastro	Gastrodia elata tuber	0.36
	Juven	Juvenile tuber	1.19
	Mother_Gastro	Mother tuber of Gastrodia elata	0.33
	Mother_Juven	Mother tuber of Juvenile	0.85