Gene detail

Detail information of GWHGAAEX011095/evm.TU.scaffold_35.23

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743804246\|ref\|XP_010927142.1\|	PREDICTED: uncharacterized protein LOC105049253 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0SVT5\|M0SVT5_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P05060_001}
TAIR	AT5G58100	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000034	1765508	1835269	-

Transcript Sequence
>GWHTAAEX011095 GAAAAGACACCCGCTCTGCCAAACTAGACCGACCCGAAAAAATAGTATCCAGTGTCGACGCCCGCCAGGTATTCGCTTCTGGAAAGAATCACAGGAACCTCTTTCGAGGTTTCTAGCGGCGCCATGGATTATTCCTCTTCCAGGAAACTTGTTTCAACAGCGTCACTGCAATACGTGTTTTCTCATCCCAGAATCGTTCTACTATTTTTCTTGGTTTTGGTGGCGGAGGCAAACGCTGCTTCGTGGGAAAAAAACACTGGGAGTGAGAGGTCTTCTGTGTTTTCGCTATTCAATCTGAAATCCAAGAGTAAATTCTGGAGCGAATCATTGATTCATACTGGTTTTGATGATTTGGAGGGCTCAATGCCTTCTAGCCATGGGAAAATGGAAGTAATTAACTACACCAAAGCAGGGAATATTGCAAACTTTTTGAAGTTGTCAGAGGTTGATTCTATATATCTTCCGGTACCCATCAACTTCATTTTTATAGGATTTGAAGGCAAAGGAAATCATGAATTTAAGATTGGCCAAGAAGAAATGTCAAGATGGTTTTCTAAAATTGATCATACATTTGAACATACCAGGATTCCTCATATTGGAGAAATTTTAACTCCATTCTATAAAACGAGTGTTGAAAAATCTCAGCGTTATCATCTACCTCTAGTTAGCCACATAAATTACAACTTTTCTGTCCATGCCATACATATGGGAGAGAAAGTTACATCCGTTTTTGAGCAAGCTGTAGCAGCTTTGTCACGAAAAGAAGTTCTTCTAGATTCAAGAGTTGATGAAGATGTTGTCTGGCAAGTGGACATTGATAGAATGGGATATGTTTTTACAACTCTTATTGAGTATCTTAAGATTGATGATGCATACAACATTTTCATTCTGAACCCCAAGTACAACAACAGGAGATTCCATTATGGTTATCGGAGAGGCTTGTCTGAATCAGAGATAAATTTTCTCAAGGAGAATAAGACATTTCAAGCCAAAATTCATCAGTCACAGCATGTCACAGGGCCGGTTCTTGAAATTGATAAGAGTGATCCAAGGCCATTGTATGTGAATCGACCTGCGTCTAACTTTGTCTGGACTACTACTGAGGAATTTAATACTTTTGAATGGTCAAAAAAATGCACTGATGTCCTGACTCATATTATATCATCCAATGAAGGAAAGGATGACGCAGAACTTCTTTTCAACAAAGTTATTCAGATGTTGCATGGCAAGGATGATTTTAACGATTTATTGCAAGAAGGGCTAAAGTCAGGGGATTTTACAAGTCTTCGCACTGAGTGTCTCACTGACACATGGATTGCAGCAAAAAGGTGGGCATTTATTGATTTGAGTGCTGGGCCCTTCTCCTGGGGTCCTGCTGTTGGCGGGGAAGGAGTACGGACAGAGCATAGCTTGCCAAATGTGGGTAAAACCATTGGAGCCGTTGCAGAAATTACAGAAGATGAAGCTGAAGACAAATTGCAGGATACAATTCGAGAAAGATTTTCATCATTTGATCATGACCATCAAGCCATTGATGTTCTCGTAGCGGAGATTGATATTTATGAGCTCTTTGCATTTAAACATTGCAAGGGGAGAAGGACAAAGCTTGCACTCTGTGATGAGCTTGATGAAAGGATGCATGATTTGAAAAGTGAACTTGAGGGATTCCATAGTGATGACTCTGATGAAAGTCATAAAAAGAAGGCTCTTGATGCGTTAAAGAGAATGGAGAAATGGAACTTGTTCACTGATACTCCTGAGGAATTTCAAAGTTATAATGTTGCACGCGATACATTTCTATCTCATATGGGGGCTACATTGTTGGGTTCTATGAGGCATGTAGTAACTCCATCAATGGCTGATGGAGCATACCATTACTATGACAAGCTATCATTTCAGATATATTTCATCACAGAGGAGAAAGTGAGGAATATAAAGAAGCTACCGGTGAACTTGAAGGCTCTATCGGATGGCCTTTCTTCATTGGCTGTTTCTTTTCAAAATATTATATTTAGCCAACACCTGCTGGCACTTTCAGAAGATCCTGCTCTTACTATGGCTTTCTCAGTTGCTCGACGAGCTGCTGTAGTTCCACTTCTACTTGTCAATGGGACCTATAGACTAACCACAAGTGCCTATTTTGATTCCTCTATTCTGCAACGACAGTTACAGAAGCTTAGTGAACATGGTTCTCTTAAAGGAAGTCATTTTTCTTCCAGGTCTACATTGGAAGTACCGATCTTCTGGTTCATTCACAATGATGCAGTATTTGTTGATAAGCATTACCAAGCAAGGGCACTTTCTGACATGATTATTGTTGTTCAATCGGATAAATCTTCCTGGGAGAGCCACTTGCATTGCAATGGAAAGCCTATTCTTTGGGATTTGCGGCGACCCATAAAGGCTGCCATTGCTGCTACTGCTGAGCATCTTGCTGGTTTACTGCCTCTTCACTTGGCGTACAGCCAGGTTCATGAGACTGCACTTGAGGATTGGACATGGTCTGTGGGCTGCAGTCCTCTATCTATCACATCTCAGGGTTGGCATCTTTCACAGTTCCACACTGATGCAATTGCCCGGAGCTATATCGTTACTGCTCTGGAGGAGTCAATACAAGCTGTTAATGCTGCTATTCGTCGCCTGGTGCTTGAGCAAACGACTTCGCAAGGTTTTAGGTTATTCAAACCCCAGGAGCGAGCAATTATGGACAAATACAACTCAGTTATCAGCTTATGGCGAAGAATTGCTGCGATATCCAGCGGTCTGCGTTATGGCGATGGATTGAAACTCCTACATTTGCTTGAAGATAATTCAAAAGGGTTTGCAGAGCAAGTGAACAGCACCATAGCAGTGTTGCATCCAGTTCACTGTACCCGGCAGAGGAGGGTTGAAATAGAGCTAGATCTTACCACCACAGTTCCAACATTGCTCATCCTCTTGGCTATTCTCTGGTTTGTGTTTCGGCCGAGGCGGCAGAAACCAAAGATCAACTGAATCTGCAGCTCCAGAAGCAATTTTCTCAGAGATTATTTTATTTTAACTTGTTAATTTGCTATATTATCTCACAAAATACTGTACTTTGTTTCAGTCTAATTTTTATTGAGATTTAGTTGCAATGGCACTCAAACCAATGTGTATCTATGAATGTCACATTCAGATTTGATGGTTAAAGAGAAAGATATTCAAAGCATGTGATACATGTCAGTGGCATGCTTGTTTTCATATTTACTATTTTTCG

Network for GWHGAAEX011095

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.630
SRP064423	SRR2545915	Juvenile tuber	63.580
SRP108465	SRR5643513	five period of Gastrodia elata	37.820
	SRR5643514	five period of Gastrodia elata	44.540
	SRR5643515	five period of Gastrodia elata	40.710
	SRR5643524	five period of Gastrodia elata	44.330
	SRR5643525	five period of Gastrodia elata	15.650
	SRR5643528	five period of Gastrodia elata	16.100
	SRR5643658	five period of Gastrodia elata	17.130
	SRR5643659	five period of Gastrodia elata	40.300
	SRR5643660	five period of Gastrodia elata	45.220
	SRR5643661	five period of Gastrodia elata	43.070
	SRR5643662	five period of Gastrodia elata	40.380
	SRR5643663	five period of Gastrodia elata	44.710
	SRR5643664	five period of Gastrodia elata	44.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	47.600
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	45.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	54.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	54.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	58.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	49.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	51.890
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	41.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.210
SRP279888	Gastro	Gastrodia elata tuber	59.34
	Juven	Juvenile tuber	59.34
	Mother_Gastro	Mother tuber of Gastrodia elata	31.47
	Mother_Juven	Mother tuber of Juvenile	46.85