Detail information of GWHGAAEX011098/evm.TU.scaffold_35.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10832.00E-73Putative transcription factor ASH1/LIN-59
nrgi|743830659|ref|XP_010934477.1|0PREDICTED: histone-lysine N-methyltransferase ATXR6 [Elaeis guineensis]
Swissprottr|Q9FNE9|ATXR6_ARATH1.00E-157Histone-lysine N-methyltransferase ATXR6
trEMBLtr|M0SQE1|M0SQE1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P19780_001}
TAIRAT5G24330_22.00E-73Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003424971772498995+
Transcript Sequence

Network for GWHGAAEX011098

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.28PHD32787.40E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.320
SRR2545915Juvenile tuber0.780
SRP108465SRR5643513five period of Gastrodia elata2.440
SRR5643514five period of Gastrodia elata3.410
SRR5643515five period of Gastrodia elata1.720
SRR5643524five period of Gastrodia elata1.750
SRR5643525five period of Gastrodia elata0.320
SRR5643528five period of Gastrodia elata0.330
SRR5643658five period of Gastrodia elata0.300
SRR5643659five period of Gastrodia elata1.080
SRR5643660five period of Gastrodia elata0.240
SRR5643661five period of Gastrodia elata0.480
SRR5643662five period of Gastrodia elata0.650
SRR5643663five period of Gastrodia elata1.030
SRR5643664five period of Gastrodia elata0.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.890
SRR6049655Rhizomagastrodiae_C368-T10_good_17.670
SRR6049656Rhizomagastrodiae_C368-T07_good_15.000
SRR6049657Rhizomagastrodiae_C368-T07_good_13.430
SRR6049658Rhizomagastrodiae_C368-T04_good_12.570
SRR6049659Rhizomagastrodiae_C368-T04_good_11.320
SRR6049660Rhizomagastrodiae_C368-T01_good_13.750
SRR6049661Rhizomagastrodiae_C368-T04_good_14.730
SRR6049662Rhizomagastrodiae_C368-T01_good_16.820
SRR6049663Rhizomagastrodiae_C368-T01_good_16.060
SRR6049664Rhizomagastrodiae_C368-T10_good_15.290
SRR6049665Rhizomagastrodiae_C368-T10_good_15.290
SRP279888GastroGastrodia elata tuber 0.55
JuvenJuvenile tuber0.24
Mother_GastroMother tuber of Gastrodia elata 0.36
Mother_JuvenMother tuber of Juvenile 0.09