Detail information of GWHGAAEX011099/evm.TU.scaffold_35.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|3.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11877.00E-154Serine/threonine protein kinase
nrgi|720092431|ref|XP_010245738.1|3.59E-165PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Nelumbo nucifera]
Swissprottr|Q8GXZ3|Y5102_ARATH1.00E-146Serine/threonine-protein kinase At5g01020
trEMBLtr|A0A061GPG5|A0A061GPG5_THECC2.00E-163Kinase superfamily protein isoform 1 {ECO:0000313|EMBL:EOY31705.1}
TAIRAT2G071807.00E-154Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003425845572602391+
Transcript Sequence

Network for GWHGAAEX011099

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1283991.80E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.910
SRR2545915Juvenile tuber3.880
SRP108465SRR5643513five period of Gastrodia elata7.280
SRR5643514five period of Gastrodia elata5.700
SRR5643515five period of Gastrodia elata7.040
SRR5643524five period of Gastrodia elata7.340
SRR5643525five period of Gastrodia elata14.610
SRR5643528five period of Gastrodia elata18.550
SRR5643658five period of Gastrodia elata17.450
SRR5643659five period of Gastrodia elata7.470
SRR5643660five period of Gastrodia elata4.380
SRR5643661five period of Gastrodia elata8.660
SRR5643662five period of Gastrodia elata8.340
SRR5643663five period of Gastrodia elata8.640
SRR5643664five period of Gastrodia elata7.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.840
SRR6049655Rhizomagastrodiae_C368-T10_good_13.830
SRR6049656Rhizomagastrodiae_C368-T07_good_13.760
SRR6049657Rhizomagastrodiae_C368-T07_good_12.430
SRR6049658Rhizomagastrodiae_C368-T04_good_11.530
SRR6049659Rhizomagastrodiae_C368-T04_good_11.730
SRR6049660Rhizomagastrodiae_C368-T01_good_13.580
SRR6049661Rhizomagastrodiae_C368-T04_good_11.830
SRR6049662Rhizomagastrodiae_C368-T01_good_14.440
SRR6049663Rhizomagastrodiae_C368-T01_good_13.440
SRR6049664Rhizomagastrodiae_C368-T10_good_15.060
SRR6049665Rhizomagastrodiae_C368-T10_good_15.060
SRP279888GastroGastrodia elata tuber 5.08
JuvenJuvenile tuber3.46
Mother_GastroMother tuber of Gastrodia elata 7.46
Mother_JuvenMother tuber of Juvenile 4.92