Detail information of GWHGAAEX011104/evm.TU.scaffold_35.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32703.00E-73Uncharacterized conserved protein
nrgi|694997745|ref|XP_009400972.1|1.34E-102PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 1-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q3EBL9|VP372_ARATH5.00E-77Vacuolar protein-sorting-associated protein 37 homolog 2
trEMBLtr|M0S039|M0S039_MUSAM5.00E-103Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15310_001}
TAIRAT3G531203.00E-73Modifier of rudimentary (Mod(r)) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003431135543150097+
Transcript Sequence

Network for GWHGAAEX011104

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07200.12Mod_r802231.00E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12185VPS37 Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms177.290
SRR2545915Juvenile tuber125.640
SRP108465SRR5643513five period of Gastrodia elata51.050
SRR5643514five period of Gastrodia elata51.540
SRR5643515five period of Gastrodia elata47.770
SRR5643524five period of Gastrodia elata45.020
SRR5643525five period of Gastrodia elata73.170
SRR5643528five period of Gastrodia elata65.560
SRR5643658five period of Gastrodia elata69.850
SRR5643659five period of Gastrodia elata82.930
SRR5643660five period of Gastrodia elata121.720
SRR5643661five period of Gastrodia elata84.800
SRR5643662five period of Gastrodia elata120.130
SRR5643663five period of Gastrodia elata103.280
SRR5643664five period of Gastrodia elata148.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.130
SRR6049655Rhizomagastrodiae_C368-T10_good_157.170
SRR6049656Rhizomagastrodiae_C368-T07_good_135.620
SRR6049657Rhizomagastrodiae_C368-T07_good_171.310
SRR6049658Rhizomagastrodiae_C368-T04_good_130.060
SRR6049659Rhizomagastrodiae_C368-T04_good_133.520
SRR6049660Rhizomagastrodiae_C368-T01_good_131.750
SRR6049661Rhizomagastrodiae_C368-T04_good_124.240
SRR6049662Rhizomagastrodiae_C368-T01_good_139.550
SRR6049663Rhizomagastrodiae_C368-T01_good_127.010
SRR6049664Rhizomagastrodiae_C368-T10_good_153.330
SRR6049665Rhizomagastrodiae_C368-T10_good_153.330
SRP279888GastroGastrodia elata tuber 64.69
JuvenJuvenile tuber52.54
Mother_GastroMother tuber of Gastrodia elata 52.66
Mother_JuvenMother tuber of Juvenile 50.61