Detail information of GWHGAAEX011107/evm.TU.scaffold_35.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22108.00E-125Oxysterol-binding protein
nrgi|672156846|ref|XP_008798110.1|0PREDICTED: oxysterol-binding protein-related protein 4C-like [Phoenix dactylifera]
Swissprottr|Q9LVD4|ORP4C_ARATH2.00E-125Oxysterol-binding protein-related protein 4C
trEMBLtr|J3MUG0|J3MUG0_ORYBR3.00E-165Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G27410.1}
TAIRAT5G572408.00E-125OSBP(oxysterol binding protein)-related protein 4C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003435480773555130+
Transcript Sequence

Network for GWHGAAEX011107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01237.17Oxysterol_BP423711.70E-50
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.230
SRR2545915Juvenile tuber2.020
SRP108465SRR5643513five period of Gastrodia elata4.170
SRR5643514five period of Gastrodia elata8.040
SRR5643515five period of Gastrodia elata5.460
SRR5643524five period of Gastrodia elata5.180
SRR5643525five period of Gastrodia elata0.160
SRR5643528five period of Gastrodia elata0.340
SRR5643658five period of Gastrodia elata0.340
SRR5643659five period of Gastrodia elata1.340
SRR5643660five period of Gastrodia elata0.950
SRR5643661five period of Gastrodia elata1.120
SRR5643662five period of Gastrodia elata1.610
SRR5643663five period of Gastrodia elata0.230
SRR5643664five period of Gastrodia elata0.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.060
SRR6049655Rhizomagastrodiae_C368-T10_good_17.330
SRR6049656Rhizomagastrodiae_C368-T07_good_15.990
SRR6049657Rhizomagastrodiae_C368-T07_good_11.910
SRR6049658Rhizomagastrodiae_C368-T04_good_15.250
SRR6049659Rhizomagastrodiae_C368-T04_good_16.310
SRR6049660Rhizomagastrodiae_C368-T01_good_13.540
SRR6049661Rhizomagastrodiae_C368-T04_good_13.240
SRR6049662Rhizomagastrodiae_C368-T01_good_110.870
SRR6049663Rhizomagastrodiae_C368-T01_good_19.470
SRR6049664Rhizomagastrodiae_C368-T10_good_19.890
SRR6049665Rhizomagastrodiae_C368-T10_good_19.890
SRP279888GastroGastrodia elata tuber 0.64
JuvenJuvenile tuber2.53
Mother_GastroMother tuber of Gastrodia elata 14.51
Mother_JuvenMother tuber of Juvenile 17.24