Detail information of GWHGAAEX011108/evm.TU.scaffold_35.54_evm.TU.scaffold_35.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|56459227|ref|YP_154508.1|9.00E-08hypothetical protein IL0116 [Idiomarina loihiensis L2TR]
KOGKOG33743.00E-56Cellular repressor of transcription
nrgi|566155373|ref|XP_002299070.2|3.42E-82cellular repressor of E1A-stimulated family protein [Populus trichocarpa]
trEMBLtr|A9PHS2|A9PHS2_POPTR1.00E-82Cellular repressor of E1A-stimulated family protein {ECO:0000313|EMBL:EEE83875.2}
TAIRAT2G046903.00E-56Pyridoxamine 5'-phosphate oxidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003435554043577683-
Transcript Sequence

Network for GWHGAAEX011108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13883.5Pyrid_oxidase_2432067.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0048037Molecular Functioncofactor binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.310
SRR2545915Juvenile tuber41.940
SRP108465SRR5643513five period of Gastrodia elata38.940
SRR5643514five period of Gastrodia elata43.440
SRR5643515five period of Gastrodia elata42.910
SRR5643524five period of Gastrodia elata42.060
SRR5643525five period of Gastrodia elata115.310
SRR5643528five period of Gastrodia elata97.090
SRR5643658five period of Gastrodia elata138.290
SRR5643659five period of Gastrodia elata28.060
SRR5643660five period of Gastrodia elata25.810
SRR5643661five period of Gastrodia elata25.670
SRR5643662five period of Gastrodia elata22.390
SRR5643663five period of Gastrodia elata26.340
SRR5643664five period of Gastrodia elata26.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.210
SRR6049655Rhizomagastrodiae_C368-T10_good_140.640
SRR6049656Rhizomagastrodiae_C368-T07_good_127.290
SRR6049657Rhizomagastrodiae_C368-T07_good_117.880
SRR6049658Rhizomagastrodiae_C368-T04_good_122.330
SRR6049659Rhizomagastrodiae_C368-T04_good_124.970
SRR6049660Rhizomagastrodiae_C368-T01_good_119.360
SRR6049661Rhizomagastrodiae_C368-T04_good_122.240
SRR6049662Rhizomagastrodiae_C368-T01_good_122.650
SRR6049663Rhizomagastrodiae_C368-T01_good_117.160
SRR6049664Rhizomagastrodiae_C368-T10_good_149.350
SRR6049665Rhizomagastrodiae_C368-T10_good_149.350
SRP279888GastroGastrodia elata tuber 24.58
JuvenJuvenile tuber20.58
Mother_GastroMother tuber of Gastrodia elata 47.77
Mother_JuvenMother tuber of Juvenile 34.03