Detail information of GWHGAAEX011114/evm.TU.scaffold_35.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16011.00E-47GATA-4/5/6 transcription factors
nrgi|672159461|ref|XP_008799492.1|3.20E-66PREDICTED: LOW QUALITY PROTEIN: protein CHLOROPLAST IMPORT APPARATUS 2-like [Phoenix dactylifera]
Swissprottr|Q9LU68|CIA2_ARATH3.00E-48Protein CHLOROPLAST IMPORT APPARATUS 2 (Precursor)
trEMBLtr|M0TJ03|M0TJ03_MUSAM8.00E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P19660_001}
TAIRAT5G571801.00E-47chloroplast import apparatus 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003439149753930091-
Transcript Sequence

Network for GWHGAAEX011114

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.13CCT3233659.70E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.200
SRR2545915Juvenile tuber11.950
SRP108465SRR5643513five period of Gastrodia elata9.790
SRR5643514five period of Gastrodia elata8.060
SRR5643515five period of Gastrodia elata12.620
SRR5643524five period of Gastrodia elata8.380
SRR5643525five period of Gastrodia elata10.640
SRR5643528five period of Gastrodia elata13.340
SRR5643658five period of Gastrodia elata10.840
SRR5643659five period of Gastrodia elata15.460
SRR5643660five period of Gastrodia elata12.430
SRR5643661five period of Gastrodia elata16.480
SRR5643662five period of Gastrodia elata19.730
SRR5643663five period of Gastrodia elata21.000
SRR5643664five period of Gastrodia elata18.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.280
SRR6049655Rhizomagastrodiae_C368-T10_good_113.080
SRR6049656Rhizomagastrodiae_C368-T07_good_19.140
SRR6049657Rhizomagastrodiae_C368-T07_good_16.950
SRR6049658Rhizomagastrodiae_C368-T04_good_16.180
SRR6049659Rhizomagastrodiae_C368-T04_good_15.830
SRR6049660Rhizomagastrodiae_C368-T01_good_15.760
SRR6049661Rhizomagastrodiae_C368-T04_good_15.340
SRR6049662Rhizomagastrodiae_C368-T01_good_18.460
SRR6049663Rhizomagastrodiae_C368-T01_good_16.210
SRR6049664Rhizomagastrodiae_C368-T10_good_111.950
SRR6049665Rhizomagastrodiae_C368-T10_good_111.950
SRP279888GastroGastrodia elata tuber 12.22
JuvenJuvenile tuber11.28
Mother_GastroMother tuber of Gastrodia elata 4.29
Mother_JuvenMother tuber of Juvenile 6.76