Detail information of GWHGAAEX011115/evm.TU.scaffold_35.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|124023465|ref|YP_001017772.1|2.00E-17ATLS1-like light-inducible protein [Prochlorococcus marinus str. MIT 9303]
KOGKOG17597.00E-51Macrophage migration inhibitory factor
nrgi|720056078|ref|XP_010273570.1|1.67E-57PREDICTED: macrophage migration inhibitory factor homolog [Nelumbo nucifera]
trEMBLtr|A0A068V7C4|A0A068V7C4_COFCA6.00E-56Coffea canephora
TAIRAT5G571707.00E-51Tautomerase/MIF superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003439429783978115+
Transcript Sequence

Network for GWHGAAEX011115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01187.17MIF21144.00E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07253MIF Metabolic pathways map01100
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.530
SRR2545915Juvenile tuber37.930
SRP108465SRR5643513five period of Gastrodia elata31.630
SRR5643514five period of Gastrodia elata31.670
SRR5643515five period of Gastrodia elata27.610
SRR5643524five period of Gastrodia elata32.360
SRR5643525five period of Gastrodia elata36.180
SRR5643528five period of Gastrodia elata35.510
SRR5643658five period of Gastrodia elata36.820
SRR5643659five period of Gastrodia elata40.510
SRR5643660five period of Gastrodia elata41.780
SRR5643661five period of Gastrodia elata39.600
SRR5643662five period of Gastrodia elata42.610
SRR5643663five period of Gastrodia elata45.860
SRR5643664five period of Gastrodia elata43.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.310
SRR6049655Rhizomagastrodiae_C368-T10_good_122.820
SRR6049656Rhizomagastrodiae_C368-T07_good_128.200
SRR6049657Rhizomagastrodiae_C368-T07_good_128.900
SRR6049658Rhizomagastrodiae_C368-T04_good_126.710
SRR6049659Rhizomagastrodiae_C368-T04_good_128.790
SRR6049660Rhizomagastrodiae_C368-T01_good_126.290
SRR6049661Rhizomagastrodiae_C368-T04_good_126.820
SRR6049662Rhizomagastrodiae_C368-T01_good_126.600
SRR6049663Rhizomagastrodiae_C368-T01_good_126.620
SRR6049664Rhizomagastrodiae_C368-T10_good_131.360
SRR6049665Rhizomagastrodiae_C368-T10_good_131.360
SRP279888GastroGastrodia elata tuber 68.73
JuvenJuvenile tuber61.77
Mother_GastroMother tuber of Gastrodia elata 37.96
Mother_JuvenMother tuber of Juvenile 37.52