Detail information of GWHGAAEX011119/evm.TU.scaffold_35.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|94971261|ref|YP_593309.1|5.00E-27serine/threonine protein kinase [Candidatus Koribacter versatilis Ellin345]
KOGKOG05816.00E-155Mitogen-activated protein kinase kinase (MAP2K)
nrgi|672170731|ref|XP_008805432.1|1.66E-179PREDICTED: mitogen-activated protein kinase kinase 5 [Phoenix dactylifera]
Swissprottr|O80397|M2K4_ARATH2.00E-155Mitogen-activated protein kinase kinase 4
trEMBLtr|K7V635|K7V635_MAIZE2.00E-169Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G834697_P01}
TAIRAT1G516606.00E-155mitogen-activated protein kinase kinase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003443997574401499+
Transcript Sequence

Network for GWHGAAEX011119

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase693252.70E-63
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE7

KEGG pathway

KO Enzyme pathway mapID
K13413MKK4_5 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.500
SRR2545915Juvenile tuber14.060
SRP108465SRR5643513five period of Gastrodia elata63.770
SRR5643514five period of Gastrodia elata73.430
SRR5643515five period of Gastrodia elata45.760
SRR5643524five period of Gastrodia elata73.640
SRR5643525five period of Gastrodia elata170.350
SRR5643528five period of Gastrodia elata113.160
SRR5643658five period of Gastrodia elata124.390
SRR5643659five period of Gastrodia elata32.450
SRR5643660five period of Gastrodia elata39.980
SRR5643661five period of Gastrodia elata31.960
SRR5643662five period of Gastrodia elata38.940
SRR5643663five period of Gastrodia elata37.450
SRR5643664five period of Gastrodia elata44.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.130
SRR6049655Rhizomagastrodiae_C368-T10_good_1115.030
SRR6049656Rhizomagastrodiae_C368-T07_good_157.650
SRR6049657Rhizomagastrodiae_C368-T07_good_179.440
SRR6049658Rhizomagastrodiae_C368-T04_good_196.850
SRR6049659Rhizomagastrodiae_C368-T04_good_1118.160
SRR6049660Rhizomagastrodiae_C368-T01_good_168.560
SRR6049661Rhizomagastrodiae_C368-T04_good_178.780
SRR6049662Rhizomagastrodiae_C368-T01_good_152.870
SRR6049663Rhizomagastrodiae_C368-T01_good_154.970
SRR6049664Rhizomagastrodiae_C368-T10_good_157.270
SRR6049665Rhizomagastrodiae_C368-T10_good_157.270
SRP279888GastroGastrodia elata tuber 39.52
JuvenJuvenile tuber36.51
Mother_GastroMother tuber of Gastrodia elata 66.20
Mother_JuvenMother tuber of Juvenile 32.47