Detail information of GWHGAAEX011121/evm.TU.scaffold_35.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291613266|ref|YP_003523423.1|4.00E-32SCP-like extracellular [Sideroxydans lithotrophicus ES-1]
KOGKOG30172.00E-53Defense-related protein containing SCP domain
nrgi|743767702|ref|XP_010914120.1|3.91E-64PREDICTED: pathogenesis-related protein PR-1 [Elaeis guineensis]
Swissprottr|Q40374|PR1_MEDTR6.00E-58Pathogenesis-related protein PR-1 (Precursor)
trEMBLtr|B9T2E4|B9T2E4_RICCO4.00E-61STS14 protein, putative {ECO:0000313|EMBL:EEF29977.1}
TAIRAT4G257902.00E-53CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003445331524534258-
Transcript Sequence

Network for GWHGAAEX011121

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00188.25CAP281472.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.150
SRR2545915Juvenile tuber3.390
SRP108465SRR5643513five period of Gastrodia elata31.350
SRR5643514five period of Gastrodia elata17.360
SRR5643515five period of Gastrodia elata5.750
SRR5643524five period of Gastrodia elata8.510
SRR5643525five period of Gastrodia elata1.480
SRR5643528five period of Gastrodia elata0.720
SRR5643658five period of Gastrodia elata0.420
SRR5643659five period of Gastrodia elata0.450
SRR5643660five period of Gastrodia elata0.070
SRR5643661five period of Gastrodia elata0.360
SRR5643662five period of Gastrodia elata0.560
SRR5643663five period of Gastrodia elata0.700
SRR5643664five period of Gastrodia elata0.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.490
SRR6049655Rhizomagastrodiae_C368-T10_good_167.950
SRR6049656Rhizomagastrodiae_C368-T07_good_129.490
SRR6049657Rhizomagastrodiae_C368-T07_good_119.520
SRR6049658Rhizomagastrodiae_C368-T04_good_111.970
SRR6049659Rhizomagastrodiae_C368-T04_good_11.910
SRR6049660Rhizomagastrodiae_C368-T01_good_114.210
SRR6049661Rhizomagastrodiae_C368-T04_good_132.040
SRR6049662Rhizomagastrodiae_C368-T01_good_185.190
SRR6049663Rhizomagastrodiae_C368-T01_good_128.390
SRR6049664Rhizomagastrodiae_C368-T10_good_175.340
SRR6049665Rhizomagastrodiae_C368-T10_good_175.340
SRP279888GastroGastrodia elata tuber 0.10
JuvenJuvenile tuber0.16
Mother_GastroMother tuber of Gastrodia elata 0.06
Mother_JuvenMother tuber of Juvenile 0.00