Detail information of GWHGAAEX011123/evm.TU.scaffold_35.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743811758|ref|XP_010929240.1|0PREDICTED: uncharacterized protein LOC105050786 isoform X1 [Elaeis guineensis]
trEMBLtr|K3YQQ7|K3YQQ7_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si016601m}
TAIRAT5G575800Calmodulin-binding protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003446931924704644+
Transcript Sequence

Network for GWHGAAEX011123

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07887.10Calmodulin_bind1033937.70E-130
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005516Molecular Functioncalmodulin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.870
SRR2545915Juvenile tuber29.450
SRP108465SRR5643513five period of Gastrodia elata35.510
SRR5643514five period of Gastrodia elata47.440
SRR5643515five period of Gastrodia elata47.660
SRR5643524five period of Gastrodia elata47.220
SRR5643525five period of Gastrodia elata41.080
SRR5643528five period of Gastrodia elata60.720
SRR5643658five period of Gastrodia elata39.410
SRR5643659five period of Gastrodia elata31.430
SRR5643660five period of Gastrodia elata28.320
SRR5643661five period of Gastrodia elata31.920
SRR5643662five period of Gastrodia elata37.050
SRR5643663five period of Gastrodia elata28.930
SRR5643664five period of Gastrodia elata28.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.290
SRR6049655Rhizomagastrodiae_C368-T10_good_124.120
SRR6049656Rhizomagastrodiae_C368-T07_good_130.860
SRR6049657Rhizomagastrodiae_C368-T07_good_126.980
SRR6049658Rhizomagastrodiae_C368-T04_good_129.390
SRR6049659Rhizomagastrodiae_C368-T04_good_124.920
SRR6049660Rhizomagastrodiae_C368-T01_good_127.190
SRR6049661Rhizomagastrodiae_C368-T04_good_122.360
SRR6049662Rhizomagastrodiae_C368-T01_good_131.870
SRR6049663Rhizomagastrodiae_C368-T01_good_134.620
SRR6049664Rhizomagastrodiae_C368-T10_good_133.570
SRR6049665Rhizomagastrodiae_C368-T10_good_133.570
SRP279888GastroGastrodia elata tuber 26.46
JuvenJuvenile tuber34.54
Mother_GastroMother tuber of Gastrodia elata 51.11
Mother_JuvenMother tuber of Juvenile 56.03