Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG4197	1.00E-75	FOG: PPR repeat
nr	gi\|695044936\|ref\|XP_009410242.1\|	5.02E-98	PREDICTED: pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Musa acuminata subsp. malaccensis]
Swissprot	tr\|O64766\|PP185_ARATH	4.00E-76	Pentatricopeptide repeat-containing protein At2g35030, mitochondrial (Precursor)
trEMBL	tr\|F6HLQ6\|F6HLQ6_VITVI	3.00E-89	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55312.1}
trEMBL	tr\|F6HLQ6\|F6HLQ6_VITVI	2.00E-18	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55312.1}
trEMBL	tr\|F6HLQ6\|F6HLQ6_VITVI	5.00E-16	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55312.1}
trEMBL	tr\|F6HLQ6\|F6HLQ6_VITVI	5.00E-14	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB55312.1}
TAIR	AT2G35030	1.00E-75	Pentatricopeptide repeat (PPR) superfamily protein

Scaffold	Start	End	Strand
GWHAAEX00000034	4961995	4962747	+

Transcript Sequence
>GWHTAAEX011130 ATGCCTGAGAGAAATTTCGCTTCCTGGAACTCTTTGATCACTGGTCTTATACAGAATAAGGACCTGAAAGGTGGCCGCAAAATGTTTGATGAAATGCGTATGAGAAATGTGATATCTTGGACGGCAATGATTTCAGGCTATGTGCAAGAAGGGGAGAATGAATTGGCGCTCAAAACTCTCATAGAAATGCTGGCTGCTGGAATTAAGCCAAATGAGGGTACAAACGTTAGCGTTCTTGCCGCCGTTAGCAGCATTGCAGCGTATATCGAAGGCTTGCAAGTCCATCAGATCATAAGCAAAACAAAGTTTTCTGCTCTGCTTAGCATGTACTCAAAGTGCGGCGATATTGGGACAGCCCGAAAGGTGTTTGATATATCAAACCAAAAGGATTTAGGAAATTGGAACGGAATGATAGCTGCGTATGCGCATCATGGCTTTGGGAACAAAGCCATTCGAATGTTTGAAGATATGCATGGCAGAAATTTGAACCCTAATGATATAACTTACATTACCCTACTTTCAGCTTGCAGCCACTCAGGCTTAGTTGAAGAAGGTCTCAAGTTTTTCAATGCTTTGTTGAAGGATGGCTCTGTTGAAGTAAGAGATGACCGTTATGCTTGTATGGTGGATATTTGTAGCCGGACAGGTCGATTGAACAAGCTTTCCGGGCTTAACAAAAATGAAATATTCTTGAGGTGTGACAGAGGTGAAGAGGCCGGTTTGGAGTGTGGCGAAGACGCGACAAAGAAATAA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13041.5	PPR_2	35	80	6.60E-09
PF01535.19	PPR	103	124	0.24
PF13041.5	PPR_2	133	177	5.10E-11

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.240
SRP064423	SRR2545915	Juvenile tuber	0.140
SRP108465	SRR5643513	five period of Gastrodia elata	0.790
	SRR5643514	five period of Gastrodia elata	0.600
	SRR5643515	five period of Gastrodia elata	0.740
	SRR5643524	five period of Gastrodia elata	0.650
	SRR5643525	five period of Gastrodia elata	0.270
	SRR5643528	five period of Gastrodia elata	0.130
	SRR5643658	five period of Gastrodia elata	0.200
	SRR5643659	five period of Gastrodia elata	1.070
	SRR5643660	five period of Gastrodia elata	1.060
	SRR5643661	five period of Gastrodia elata	0.830
	SRR5643662	five period of Gastrodia elata	0.830
	SRR5643663	five period of Gastrodia elata	1.350
	SRR5643664	five period of Gastrodia elata	0.760
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.710
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.550
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.610
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.970
SRP279888	Gastro	Gastrodia elata tuber	1.33
	Juven	Juvenile tuber	0.37
	Mother_Gastro	Mother tuber of Gastrodia elata	0.14
	Mother_Juven	Mother tuber of Juvenile	0.12