Detail information of GWHGAAEX011133/evm.TU.scaffold_35.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479128768|ref|YP_005068728.1|4.00E-23serine/threonine protein kinase [Arthrospira platensis NIES-39]
KOGKOG11872.00E-149Serine/threonine protein kinase
nrgi|743767777|ref|XP_010914159.1|0PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Elaeis guineensis]
Swissprottr|Q5XF57|Y5576_ARATH3.00E-121Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBLtr|M0T3Y4|M0T3Y4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P03860_001}
TAIRAT2G188902.00E-149Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003450917675095745+
Transcript Sequence

Network for GWHGAAEX011133

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr613241.40E-39
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VI

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.720
SRR2545915Juvenile tuber12.370
SRP108465SRR5643513five period of Gastrodia elata13.090
SRR5643514five period of Gastrodia elata10.070
SRR5643515five period of Gastrodia elata10.960
SRR5643524five period of Gastrodia elata11.740
SRR5643525five period of Gastrodia elata17.280
SRR5643528five period of Gastrodia elata7.540
SRR5643658five period of Gastrodia elata10.210
SRR5643659five period of Gastrodia elata10.850
SRR5643660five period of Gastrodia elata8.880
SRR5643661five period of Gastrodia elata9.860
SRR5643662five period of Gastrodia elata9.690
SRR5643663five period of Gastrodia elata9.390
SRR5643664five period of Gastrodia elata9.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.040
SRR6049655Rhizomagastrodiae_C368-T10_good_18.540
SRR6049656Rhizomagastrodiae_C368-T07_good_17.320
SRR6049657Rhizomagastrodiae_C368-T07_good_16.050
SRR6049658Rhizomagastrodiae_C368-T04_good_16.870
SRR6049659Rhizomagastrodiae_C368-T04_good_15.860
SRR6049660Rhizomagastrodiae_C368-T01_good_17.000
SRR6049661Rhizomagastrodiae_C368-T04_good_18.080
SRR6049662Rhizomagastrodiae_C368-T01_good_18.680
SRR6049663Rhizomagastrodiae_C368-T01_good_18.350
SRR6049664Rhizomagastrodiae_C368-T10_good_18.420
SRR6049665Rhizomagastrodiae_C368-T10_good_18.420
SRP279888GastroGastrodia elata tuber 11.69
JuvenJuvenile tuber8.81
Mother_GastroMother tuber of Gastrodia elata 7.43
Mother_JuvenMother tuber of Juvenile 7.57