Gene detail

Detail information of GWHGAAEX011134/evm.TU.scaffold_35.95

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|383761408\|ref\|YP_005440390.1\|	1.00E-109	monogalactosyldiacylglycerol synthase family protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
nr	gi\|743805111\|ref\|XP_010927356.1\|	0	PREDICTED: probable monogalactosyldiacylglycerol synthase 3, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q0DWQ1\|MGDG3_ORYSJ	0	Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (Precursor)
trEMBL	tr\|B6SV07\|B6SV07_MAIZE	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GRMZM2G178892_P01}
TAIR	AT5G20410	0	monogalactosyldiacylglycerol synthase 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000034	5158659	5164045	-

Transcript Sequence
>GWHTAAEX011134 CCTGGAGAATTATACCCGAATCTTGAAATAAAAAGCTTTGTGAATTTCAGTAATTTCCCTCTATTATAAGGAAAATCCAGCTCTCTTCTGCCCCCAAAAATATCCGAAGGCCAGCTTTCATTCCTTCAGGCATTTTCATCTTAAACAAAGCCCTTCCCTTCTTTTCCTGAACAAGTGCAGCCCGTGGCCTGGCACCGGTGAAGACGGTGATGTCGGTGGAATCAGGGAGACGGTCGATCCGTGAGGCGGTGGTGGATAGGGTGTTGGGCTACCATGGAAGGAGCCCGCACGGTAAGCTCCGGTTGCCAGGTTCAGGCGGAGATCTCAGATTAGAGGATGAAGAGGAGCTTGGAGTTTGGGAGGAGGATGAGGGGACCGTCGAGCTCGTCGAGCTCGGAGCTCAGCGCCCCAAAAATGTTCTCATTCTCATGAGCGACACCGGCGGAGGCCATCGCGCCTCCGCCGAGGCCATACGCGATGCCTTCCGCCTTGAATTCGGCGATGAATATAAGGTGTTTGTGAAAGATGTGTGTAAAGAGAGTGCTGGGTGGCCGCTGAACAACATGGAGAGATCTTACAAATTCATGGTGAAGCATGTTCAACTATGGAGGGTAGCATTCTTCAGCACTTCTCCTCGATGGGTACATTGTTTCTACCTCGCTGCCATTGCTGCATTCTATGCCAAGAAAGTGGAGGCAGGAATTAAGAAGTACAAGCCGGACATAATCATAAGCGTTCATCCCCTAATGCAGCACATACCACTATGGGTGCTCAAATGGCAAAACCTTCAGAGAAGAGTTGTTTTTGTTACGGTTATCACCGACCTAAACACTTGCCACCCTACGTGGTTTCATGCTGATGTTAATAGGTGCTATTGTCCATCTGAGGAAGTAGCTAAAAGAGCTGCTTTTGATGGACTCCAACCCTCCCAGATTCGTGTATTTGGCCTGCCGATCAGGCCTTCATTTTGCCGGGCAGTCCTCTCTAAGGATGACTTGAGGGTGGAACTTGAGATGAACCCTGATCTTCCAGCTGTATTGCTGATGGGTGGTGGTGAGGGGATGGGTCCTGTAAAGAAGACTGCAAAAGCCCTTGGAGAATCATTATATGACTCCTCTGAAGGAAAACCTATAGGGCAGCTTGTTGTTATCTGTGGAAGGAACCATGCTCTAAGCTCCTCCCTTCAATCTCTTCAGTGGAAAATTCCTGTGAAGATAAGAGGATTTGAAACCCAAATGGAAAAGTGGATGGGTGCTTGCGACTGCATCATAACCAAGGCTGGACCTGGAACCATTGCTGAGGCTTTAATTAGGGGACTTCCTATTATTCTCAATGACTTCATTCCTGGACAGGAAGTTGGAAATGTCCCTTATGTGGTGGACAATGGCGCTGGGGTGTACTGCAAAAGCTCCCAACAGACTGCAAAGCTGGTTGCCCGTTGGTTTGGAACAGACTCTGCCGAGCTCAAAAAGATGTCAGAGTGCGCCCGGAAATTGGCTCAGCCGGAGGCTGTCTTTGACCTTGTGAAGGACATCCATGAACTAGCTCAAGAGCAGCGGCCCGCATCCAGCATTCCTTACACATTGACTTCTTCATGCGCTTCTTCCTTCATTTACGGGGCCTCGTAGAATCACCGGTAATGGTGGAGCCGGATTTCAGAAGAAAGAGGGGGCATTTTAGCTGAAGCACTGCATACTGTTTCTTTATACTACAGATCTTAGAATGCCACTTTAACTCTGAAGTTTGCCTACAAAGATGTTCTTGGAGATACAAAAGCTGTTTGAAGAGGTTAGGTGTAGAGAAGATTGAATTTTTTTTTTGGGGCGTCTGAATAGGGGAAAAAAAGAATAATTAAATGTTTTCAGTCAATTGAAACAGCATTTGCATTGTTTTTTCCCACTGAAAGCGTTTCTGTATTAGTTCGTGTCAACATTTGTATGTTTTTTCCTTCTCTTCTGTTTTGATCTGAGAATTGTAAATTGCATCATGATTTTGCTTCATTGAGGGCATTAATATTTTTTTGAGAGTGAAATCCTTTGTTATTAGAACATGCATTCATTCATTCAAAG

Network for GWHGAAEX011134

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06925.10	MGDG_synth	81	249	9.00E-59
PF04101.15	Glyco_tran_28_C	307	408	8.20E-10

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT28

KEGG pathway

KO	Enzyme	pathway	mapID
K03715	MGD	Metabolic pathways	map01100
K03715	MGD	Glycerolipid metabolism	map00561

Gene Ontology

GO term	Ontology	Name
GO:0009247	Biological Process	glycolipid biosynthetic process
GO:0016758	Molecular Function	transferase activity, transferring hexosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.960
SRP064423	SRR2545915	Juvenile tuber	0.830
SRP108465	SRR5643513	five period of Gastrodia elata	0.720
	SRR5643514	five period of Gastrodia elata	0.820
	SRR5643515	five period of Gastrodia elata	1.130
	SRR5643524	five period of Gastrodia elata	0.820
	SRR5643525	five period of Gastrodia elata	14.380
	SRR5643528	five period of Gastrodia elata	10.250
	SRR5643658	five period of Gastrodia elata	7.200
	SRR5643659	five period of Gastrodia elata	1.120
	SRR5643660	five period of Gastrodia elata	1.280
	SRR5643661	five period of Gastrodia elata	1.580
	SRR5643662	five period of Gastrodia elata	2.490
	SRR5643663	five period of Gastrodia elata	2.300
	SRR5643664	five period of Gastrodia elata	1.850
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.530
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.560
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.190
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.660
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.660
SRP279888	Gastro	Gastrodia elata tuber	1.97
	Juven	Juvenile tuber	0.40
	Mother_Gastro	Mother tuber of Gastrodia elata	1.02
	Mother_Juven	Mother tuber of Juvenile	0.72