Detail information of GWHGAAEX011138/evm.TU.scaffold_35.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|2.00E-24serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06982.00E-160Serine/threonine protein phosphatase
nrgi|743803880|ref|XP_010927050.1|1.67E-175PREDICTED: probable protein phosphatase 2C 59 [Elaeis guineensis]
Swissprottr|Q8RXV3|P2C59_ARATH2.00E-170Probable protein phosphatase 2C 59
trEMBLtr|B9RNR4|B9RNR4_RICCO1.00E-174Protein phosphatase 2c, putative {ECO:0000313|EMBL:EEF46832.1}
TAIRAT5G249402.00E-160Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003453944505425990+
Transcript Sequence

Network for GWHGAAEX011138

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C622725.50E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.200
SRR2545915Juvenile tuber26.500
SRP108465SRR5643513five period of Gastrodia elata34.120
SRR5643514five period of Gastrodia elata34.940
SRR5643515five period of Gastrodia elata35.480
SRR5643524five period of Gastrodia elata35.090
SRR5643525five period of Gastrodia elata41.180
SRR5643528five period of Gastrodia elata43.660
SRR5643658five period of Gastrodia elata38.120
SRR5643659five period of Gastrodia elata39.770
SRR5643660five period of Gastrodia elata39.990
SRR5643661five period of Gastrodia elata38.340
SRR5643662five period of Gastrodia elata35.380
SRR5643663five period of Gastrodia elata37.660
SRR5643664five period of Gastrodia elata31.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.200
SRR6049655Rhizomagastrodiae_C368-T10_good_129.540
SRR6049656Rhizomagastrodiae_C368-T07_good_139.610
SRR6049657Rhizomagastrodiae_C368-T07_good_130.010
SRR6049658Rhizomagastrodiae_C368-T04_good_133.350
SRR6049659Rhizomagastrodiae_C368-T04_good_138.640
SRR6049660Rhizomagastrodiae_C368-T01_good_133.450
SRR6049661Rhizomagastrodiae_C368-T04_good_128.240
SRR6049662Rhizomagastrodiae_C368-T01_good_127.470
SRR6049663Rhizomagastrodiae_C368-T01_good_133.220
SRR6049664Rhizomagastrodiae_C368-T10_good_139.120
SRR6049665Rhizomagastrodiae_C368-T10_good_139.120
SRP279888GastroGastrodia elata tuber 39.56
JuvenJuvenile tuber32.52
Mother_GastroMother tuber of Gastrodia elata 41.80
Mother_JuvenMother tuber of Juvenile 35.62