Detail information of GWHGAAEX011139/evm.TU.scaffold_35.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|589912864|gb|AHL24648.1|0WRKY transcription factor [Dendrobium catenatum]
Swissprottr|Q9SV15|WRK11_ARATH1.00E-110Probable WRKY transcription factor 11
trEMBLtr|F6H9I7|F6H9I7_VITVI3.00E-127Putative uncharacterized protein {ECO:0000313|EMBL:CCB48880.1}
TAIRAT4G315506.00E-109WRKY DNA-binding protein 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003455887575590727+
Transcript Sequence

Network for GWHGAAEX011139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10533.8Plant_zn_clust1782263.90E-22
PF03106.14WRKY2302868.00E-27
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms142.810
SRR2545915Juvenile tuber102.730
SRP108465SRR5643513five period of Gastrodia elata237.550
SRR5643514five period of Gastrodia elata130.710
SRR5643515five period of Gastrodia elata246.580
SRR5643524five period of Gastrodia elata160.140
SRR5643525five period of Gastrodia elata316.910
SRR5643528five period of Gastrodia elata306.650
SRR5643658five period of Gastrodia elata224.340
SRR5643659five period of Gastrodia elata157.730
SRR5643660five period of Gastrodia elata124.500
SRR5643661five period of Gastrodia elata191.640
SRR5643662five period of Gastrodia elata247.260
SRR5643663five period of Gastrodia elata187.120
SRR5643664five period of Gastrodia elata326.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1290.920
SRR6049655Rhizomagastrodiae_C368-T10_good_1288.580
SRR6049656Rhizomagastrodiae_C368-T07_good_1231.040
SRR6049657Rhizomagastrodiae_C368-T07_good_1276.410
SRR6049658Rhizomagastrodiae_C368-T04_good_1268.800
SRR6049659Rhizomagastrodiae_C368-T04_good_1354.670
SRR6049660Rhizomagastrodiae_C368-T01_good_1340.580
SRR6049661Rhizomagastrodiae_C368-T04_good_1279.840
SRR6049662Rhizomagastrodiae_C368-T01_good_1175.750
SRR6049663Rhizomagastrodiae_C368-T01_good_1259.540
SRR6049664Rhizomagastrodiae_C368-T10_good_1234.800
SRR6049665Rhizomagastrodiae_C368-T10_good_1234.800
SRP279888GastroGastrodia elata tuber 171.35
JuvenJuvenile tuber88.69
Mother_GastroMother tuber of Gastrodia elata 665.95
Mother_JuvenMother tuber of Juvenile 872.83